| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2147 |
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| Symbol | |
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| ID | 4923367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2493419 |
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| End bp | 2494345 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163732 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094272 |
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| Protein GI | 127513075 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.145489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.847177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTTA GCCACACGCC CGTAGAGGCT GTCTGCCTTG GGGAGCACAA GGTCTATGTG
AAGCGCGACG ATCTGCTGCA TCCCGAGTTT TCCGGTAATA AGGCGCGTAA GTTTGCCTAT
TTCCTTGAGA ACGACTTCCC CTCTGTTAGG CAACTGATTG GCTATGGCTC GCCCCAGGCC
AACTCCCTCT ATTCGCTTTC GGCCCTGGCT AAGCTCAAGG GGTGGCGGCT GGATTTCTAC
GTGGACCATC TCCCCAGTTA TCTGACGGAG CACCCCTGCG GCAACTACCT AGCGGCGTTA
GATAACGGCG CCAACATCAT AGATCTCTCA AGAAAGACGG ATCGAGATGG ATTGGATAGC
GAAGCTTATA TAAGGCAAAG GGTGTTGACG GGCAGCGATG AGCAGCTGTT TGTGCCAGAA
GGGGGGCGCT GCGCCTTTGC CGAGCCGGGC GTCGCCCAGC TTGCCCGCGA GATAGCCAGC
TGGAAAAGCG CGCAGCCCCT TAACGAGTTA GTGGTGTTTC TGCCATCCGG CACAGGCACC
ACGGCGCTCT ATCTGCAGAA ACAGTTCCTA GCTATAGATC CCAGCATCAG CGTCATGACC
TGCGCCGTGG TGGGAGGCGA TGAGTATCTT AAGAAGCAAT TTTTAGCGCT TGAGCAAGAC
GAAGCGCTGC ATCCTCAGAT AGTCCCGGCC GCTAAGCGCT ACCACTTTGG CAAGCTGTAC
CCTGAGTTTT ACCAGATGTG GCATGAACTC GAGTCGACGG GGATAGCGTT TGAGCTGCTC
TACGATCCCC TGGGCTGGCT TTGCCTCAAG CAGCTGTGGC AACAGGGGTT AGCTGCGCCC
GTGCTCTATC TGCACCAAGG GGGCCTGCTG GGTAATCAAT CTATGCTGCC TAGGTATAGG
CGTAAGTTTG GTGAGCTAGA GAGATAA
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| Protein sequence | MKLSHTPVEA VCLGEHKVYV KRDDLLHPEF SGNKARKFAY FLENDFPSVR QLIGYGSPQA
NSLYSLSALA KLKGWRLDFY VDHLPSYLTE HPCGNYLAAL DNGANIIDLS RKTDRDGLDS
EAYIRQRVLT GSDEQLFVPE GGRCAFAEPG VAQLAREIAS WKSAQPLNEL VVFLPSGTGT
TALYLQKQFL AIDPSISVMT CAVVGGDEYL KKQFLALEQD EALHPQIVPA AKRYHFGKLY
PEFYQMWHEL ESTGIAFELL YDPLGWLCLK QLWQQGLAAP VLYLHQGGLL GNQSMLPRYR
RKFGELER
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