| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2128 |
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| Symbol | |
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| ID | 4923494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2466551 |
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| End bp | 2468593 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163713 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001094253 |
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| Protein GI | 127513056 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA GCAAGAGCGA AAACATCGGC CGTCAAAGCC TGCTATGGTT ACTGCTGGTT
AACCTAAGCG TGCTGGCGCC CCTCTACGAT AAGATGACCC CCTGGAGCAT GGCCATCTGC
GCCATCTGCC TCCTCTGGCG AGTGGGGATC TTTGCCGGTA AAGTCGCCAA GCCGCCGAGA
TACCTGGTCA CCACATTGGC GATCGCCTCC GCTGTCACTC TCGCCTTAGT CACGGCGCAG
ATAGGCCTGC TTAATGGTTT GATCAATTTG CTGATCTTGG GCTATGCCCT CAAATATATC
GAGATGCGTG ACAGACGCGA CGTGCGCGCC GTGGTGCTGG TGGGCTTCTT CCTCATCGCA
ATCACCCTAA TCGAAAAACA GAGCCTCTGG TTTACCCTGC AACTGACCCT GGTCGCCACC
ATTAACATCT GTGTGCTGGT CAGCCTCTAT CTTAATGCCA GCTCCATTCG CCGCACTGCC
AAGCTTGGCG CCAAAATCAT GCTGCAGAGC CTGCCATTGG CGATTGTATT GTTTATGGTG
CTGCCAAGAC TGCCGCCACT CTGGCTGGTG CCAAATCCCA AGAATGCCAC CACAGGGCTC
AGCGACGAGC TCTCCTTCGG CGATATCGGC AAGCTGACCC GCTCCAGCGC CCTGGCCTAT
CGCGTCACCT TCGATAACCG CCGTCCGGCC AACAATCAGC TCTATTGGCG CGCCCTGGTG
CTGGATCACT ATGATGGTAA AACTTGGACC CAAGATCCCG GCATCAAGAC GCTGCAACGA
CAGCTCACAG TATCAAACGC TCGCCCTAGC CCCGAAGGTA CCTCGATAAA CTATGAGGTG
ATCGCCGAGC CCAGTTACCA AAACTGGCTC TTCGGCCTGG ATCTCGCCTA CACCAATACC
CGGGAGATCC TAGAGCTGCC CGATGGCCGC CTCTACGCCA AGGCGCCCCT GAGTCAGAAA
TACCAGTATC GGGTCTCCTC CTATCCGCAG GCGAAACTGG ATCCTCGTCT GTCACCTGAG
CTTAGACGCC GCAACCTGCA GTTACCGCAA GATTCCAATC CAAGATCTCA GGCATTGGGG
CTTGAACTGA AACGCGACTA TCCGGAACCC GAGCGGCGCC TTAACGCCAT CATGACGTTG
TTTAACAAGT CGCCCTATTT CTATACCCTG GAGCCACCTA GGGTCGGCCC ACAGCAGATC
GATGACTTTC TGTTTGAGAA TCGCGCCGGT TTCTGCGCCC ACTACGCCAG TGCCATGGTG
TTTCTCGCCC GCCAATCAGG CCTGCCAGCC CGCATGGTCA CGGGTTATCA GGGCGGTGAG
TGGAATCAGG CCGGCGGTTA CCTCAGCGTC TATCAATATA TGGCCCACGC CTGGGTCGAG
GTATGGCTCG AGGGTAAGGG CTGGACCCGC TACGACCCTA CCGCCATGAT CGCCCCCGAG
CGGGTCGAGG CAGGCTTCGA TGCCATGTTC TCCCCCGAGC AGAGCTATCT GATCAACAAC
CCCTTTAGCA GCCTGAGGCT GCGTCAGTAT CCCCTGCTCA ATAATTTGCG CATGTCCCTG
GCCAGCATAG ATTACTACTG GAGCAAGTGG GTACTGGGCT TCAATGAAGA GAGACAAAGC
CAACTGCTCA AGGAACTACT TGGCGAGATC AACGCCACCA AACTGGCGAT CTTCATCATC
GCCTCCTTCA GCGTCATCGC CCTGTTTATC GCCTACAGCG TCGGCTTGCT GCGCTTTACT
CGCCACCCAG ATCCTGTCGT TGCGGGATTT GAGCAGATAG GTGCCATGCT GGCCAAACGC
GGCCTACCCC GTGCTCAGGG TGAGTCGGTC GATGCCTATC AAACACGGGT ACTCGCTGCC
GCGCCCGAAC TGAGTGAGCC AATGACGCGC TACACCACAA GTTATATTAC GCTGAAATAT
CGCGCCCCCT CTCTAAAGGC CAGCAAACAG CTTAAGCGTC AGCTGAAACA GGATCTGCGC
CGCCTGCGCC TGGCTATCCT CAGGCTCAAG GGCAACTTAG CTACCAGCGA AAACACAGAT
TAG
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| Protein sequence | MADSKSENIG RQSLLWLLLV NLSVLAPLYD KMTPWSMAIC AICLLWRVGI FAGKVAKPPR
YLVTTLAIAS AVTLALVTAQ IGLLNGLINL LILGYALKYI EMRDRRDVRA VVLVGFFLIA
ITLIEKQSLW FTLQLTLVAT INICVLVSLY LNASSIRRTA KLGAKIMLQS LPLAIVLFMV
LPRLPPLWLV PNPKNATTGL SDELSFGDIG KLTRSSALAY RVTFDNRRPA NNQLYWRALV
LDHYDGKTWT QDPGIKTLQR QLTVSNARPS PEGTSINYEV IAEPSYQNWL FGLDLAYTNT
REILELPDGR LYAKAPLSQK YQYRVSSYPQ AKLDPRLSPE LRRRNLQLPQ DSNPRSQALG
LELKRDYPEP ERRLNAIMTL FNKSPYFYTL EPPRVGPQQI DDFLFENRAG FCAHYASAMV
FLARQSGLPA RMVTGYQGGE WNQAGGYLSV YQYMAHAWVE VWLEGKGWTR YDPTAMIAPE
RVEAGFDAMF SPEQSYLINN PFSSLRLRQY PLLNNLRMSL ASIDYYWSKW VLGFNEERQS
QLLKELLGEI NATKLAIFII ASFSVIALFI AYSVGLLRFT RHPDPVVAGF EQIGAMLAKR
GLPRAQGESV DAYQTRVLAA APELSEPMTR YTTSYITLKY RAPSLKASKQ LKRQLKQDLR
RLRLAILRLK GNLATSENTD
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