| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2079 |
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| Symbol | aspS |
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| ID | 4923615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2402603 |
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| End bp | 2404381 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163661 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001094204 |
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| Protein GI | 127513007 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.725699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGTC ATTATTGTGG AGACGTTAAT CGGTCTCATG TTGGGGAAGA AGTTACTCTC
GTAGGTTGGG TAAACCGCAG TCGCGATCTC GGCGGCGTGG TTTTTCTGGA TTTGCGCGAC
CGTGAAGGCG TGATTCAGGT AGTATATGAT CCTGATCTGC CAGAGGTATT CGATGTCGCC
AGCACACTGC GCAGCGAGTT CTGTGTTCAG GTTAAAGGCC TGGTACGCGC GCGTCCCGAC
AGCCAGATCA ACGATCAGAT GCGCACAGGT GAGATTGAGG TGCTGGGTAA GGCCCTGACC
ATTCTCAACA GCGCACCGGC ACTGCCGATC AACATGGACA AAAATCAACA CAACACCGAA
GAGCAGCGTC TTAAGTATCG CTACCTGGAT CTGCGTCGCC CAGAGATGGC CGAGCGCATC
ATCTTCCGCT CTAAGGTGAC CAGCGCCGTG CGTCGTTTCC TCGACGGTAA CGGCTTCCTC
GATATCGAGA CCCCAATTCT GACCAAGGCA ACCCCAGAAG GTGCCAGGGA CTATCTGGTG
CCTAGCCGTA CCTACAAGGG CCAGTTCTTC GCGCTGCCAC AATCACCACA GCTGTTTAAA
CAGCTGCTGA TGATGTCTGG CTTCGACCGT TACTACCAGA TCGTGAAATG TTTCCGCGAC
GAAGACTTAC GCGCCGACCG TCAGCCTGAA TTTACCCAGA TCGATATCGA AACCTCTTTC
ATGACCTCAG CGCAGGTGAT GGACAAGACT GAAGAGATGG TACGCGGCCT GTTTAAAGAG
CTGCTGAACG TCGACCTGGG CGAGTTCCCT AAGATGACTT TCGCCGAAGC GATGCGCCGT
TACGGCTCAG ACAAACCAGA TCTGCGTAAC CCGCTGGAGC TGGTCGATGT AGCCGACCTG
GTTAAAGATG TCGACTTCAA GGTGTTCCAG GAGCCAGCCA ACGACAGTGA AGGCCGTGTT
GCCGTGCTGT GTGTGCCGGG CGGCGCTAGC CTGTCACGTA AGCAGCTCGA TGAGTATGGC
AAGTATGTCA ACATCTATGG CGCCAAAGGC TTGGCGTGGA TGAAGGTCAA CGAGCTGGAG
AACGGCCTGG AAGGCATTCA GTCACCAGTG CTTAAGTTCT TAAGCGAAGA GGTGGTTAAG
GGGATCCTGG AGCGCACAGG TGCGGCCAAC GGTGACCTAA TCCTGTTCGG TGCCGACAAG
GCGAACATAG TAGCCGAAGC CATGGGCGCG CTGCGTCTCA AGGTAGGTGA AGATTTCGAT
CTGCTTCAAG GCGACTGGAA ACCGCTATGG GTGGTTGACT TCCCAATGTT CGAGCGCACC
TCTGACGGTG GCCTGCATGC CATGCACCAC CCGTTCACTG CGCCGAGTGG TATCACGCCA
GCCGAGCTGG AAGCGGATCC AACGGCGGCC ATCTCTGACG CCTATGACAT GGTACTTAAC
GGTTGTGAAC TGGGCGGTGG CTCGGTACGT ATCTACGACG CCGAGATGCA GTCGGCCGTG
TTCAGAATCC TGGGGATTAA CGATGAGGAA GCCCAAGAGA AGTTTGGCTT CCTGCTAGAG
GCCCTCAAGT ATGGTACGCC GCCACACGCA GGTTTGGCAT TCGGCCTCGA CCGTATGGTG
ATGCTGATGA CAGGTGCCAG CTCGATTCGC GACGTGATGG CTTTCCCTAA GACCACCACG
GCAGCCTGTC CGCTCACCAA CGCCCCTGGC TTTGCTAACC CGGTACAGCT CGAGGAGCTT
GGGGTGAGTG TAGTGGAAGC GAAAAAAGAG CAGGAATAG
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| Protein sequence | MRSHYCGDVN RSHVGEEVTL VGWVNRSRDL GGVVFLDLRD REGVIQVVYD PDLPEVFDVA
STLRSEFCVQ VKGLVRARPD SQINDQMRTG EIEVLGKALT ILNSAPALPI NMDKNQHNTE
EQRLKYRYLD LRRPEMAERI IFRSKVTSAV RRFLDGNGFL DIETPILTKA TPEGARDYLV
PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF
MTSAQVMDKT EEMVRGLFKE LLNVDLGEFP KMTFAEAMRR YGSDKPDLRN PLELVDVADL
VKDVDFKVFQ EPANDSEGRV AVLCVPGGAS LSRKQLDEYG KYVNIYGAKG LAWMKVNELE
NGLEGIQSPV LKFLSEEVVK GILERTGAAN GDLILFGADK ANIVAEAMGA LRLKVGEDFD
LLQGDWKPLW VVDFPMFERT SDGGLHAMHH PFTAPSGITP AELEADPTAA ISDAYDMVLN
GCELGGGSVR IYDAEMQSAV FRILGINDEE AQEKFGFLLE ALKYGTPPHA GLAFGLDRMV
MLMTGASSIR DVMAFPKTTT AACPLTNAPG FANPVQLEEL GVSVVEAKKE QE
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