| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2011 |
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| Symbol | |
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| ID | 4924262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2324259 |
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| End bp | 2327441 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163583 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001094136 |
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| Protein GI | 127512939 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0404797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGATC CAAATAAAGG CATGATCGCC TGGTTTGCCC GCAACAGCGT GGCGGCAAAC
CTGCTGATGA TCATCATCAT TATCGGAGGT CTGCTGACCG CCAGCACGAT ACGCAAACAG
TTTTTTCCCC AGACAGAGAC CAACTGGGTC GAGTTTAGCG CCTTCTATCC TGGCGCCGCA
CCCCAAGAGG TAGAGGAAGG GATCACCATC AAGGTCGAGG AAGCCTTGGA GCGGGTACAG
GGCCTGAAGC GGGTGATCAC CTATTCTAAC CGTAACTCGG CATCGGGCTA TTTTCGTATC
GAAGACTCCT ACGACCCTCA GGTGGTCTTG GATGAGATCA AATCTGAGAT CGATTCTATA
TCAAGCTTCC CCGATGGCAT GGAACGACCG CGGGTTGAGC GCATCAAGAA TCGACAGGAG
GTGTTTTATA TCAGCCTCTA TGGCGACCTG CCGCCAAAGA AGCTCAAAGA GTTCGGCGAG
AAGATCCACG ATGAGTTGAT GCAGTTGCCG CTGGTGAACA TCACAGAGTT TTATGGCGGA
CTGGACTATG AGATGTCTAT CGAGGTCAGC AAGGATAAGC TGCGCGAATA CAACCTCTCC
TTCAACGATG TCGCCAAGGC GGTTCGCGGT TATTCACGCA ACATGTCGGC CGGCCAAATC
AAGGCCGAGA ACGGCTACAT CAGCTTGAGG GTGCAAAACC AAGCCTATGT CGGCTACGAG
TTTGAGAATC TGCCGCTGAT CACCCTAGAA GATGGCACCA AGTTGCTGCT TGGCGATGTG
GCCAATGTGG TCGACGGTTT CGAAGAGGGT ATTCAATACT CCAAGTTTAA CGGTAAGAAC
TCGGTAACTT TCTTCGTGGG CGCATCAAAC GATCAGAGCA TGACGGATGT CGCTAAGGTA
GTGAACCAAT ACGTAGAAGA TAAACAGGCC TCACTGCCCC AGGGCTTGAA CCTGGAAACC
TGGGTTGATA TGACCTATTA CCTGCAGGGC CGTCTGGATC TTATGCTCGA CAGCATGAAA
AGCGGCGCCA TCTTGGTGTT TATTATGTTG GCCCTATTCC TGCGTGTTCG CCTCGCCTTC
TGGGTGATGA TGGGGCTGCC CGTCTGCTTC TTAGGCACGC TGCTGCTGAT GCCGACCGCC
ATGATAGATG TCACTATCAA CGTGATCAGC CTGTTTGCCT TCATCCTTGT GCTGGGGATA
GTGGTCGACG ATGCCATCGT CATGGGCGAG AGTGCTCATA CCGAATGTGA AGAGAAAGGC
CAGAGCATAG ATAATGTGAT CCGCGGCGTG AAGAAAGTAG CCATGCCCGC CACCTTCGGC
GTGTTGACCA CCATTGCCGC CTTCCTGCCC ATCACCATGG ACGATGGGCC TTCATCGGCC
TTCGGTCAGT CGATCGGCTA TGTGGTGATC TTATGCCTGC TGTTCTCGCT GGTGGAGTCT
AAGCTCATCC TACCGGCGCA CTTAGCCAAG ATGAAACATA AAACTCAGGT TAAGCCGGGC
TCTAAGAATC CCATCAACCT GCTGCGTATC GGGGTCAACT ATCTACAGGC CAAGGTGGAC
AATGGACTAC AGTTTGTGAT CTATCGTCTG TACAAGCCGT CATTAACATT GTCGGTGAAA
TACAGATACA TGATCATTGC CCTGTTCATC TCCTTAATTC TGGTCTGCGC CGGCCTCTAT
TCCGGCGGGA TCCTGCGCTA CGTGGGACAA CCTAAGATCC CCCATGATTT CCCGCGCATC
AGCGTCGAGA TGAACCTGGA CTCATCAGAG CAAGCGACCC TGTCTGCCGC ATTGGCGATC
GAGGCGGCGC TGCATAAGGT CGATGATCAG CTGGAACAGG AGTTTGGCCA ACGAATGATC
GCCGACATGC AGGTCGATCT TCAGGGCAGA ACCCGTGCCC AGGTGATGAC TAAGCTGGTG
ACCCCAGAGC TAAGGCCCAT AGATACCTTT GCCCTCGCCG AGCGCTGGCG TGCGGCCATG
CCGCAGATCC CAGGGGTGAA GTCCTTCAAT ATTCAGGATA ACCTCTTCGG TGGCGGCCGC
GACGATGGCG ACATCAGCTT CCGTCTCGAA GGCAAAGACG AGGCACAACT CATCGCCGCG
GCGAAGGCGC TCAAGGCTAA GCTTAACAGC CTGCAGGGCG TTGGCGATGT CAACGACAGC
CGCCAGTCCA GCGCCAAAGA GGTGCAATTT AGCCTCAAGC CTCTGGCCAA TAGCGTCGGC
CTTACCCTTG CCGATGTCGC CTCTCAGGTC AGCGCCAGCT TCTACGGTCT CGAGGCCCAG
CGTATTTTGC GTAACGGCGA AGAGATCAAG GTGATGCTGC GCTATCCCGA AGAGCAGCGC
AACTCCATCG CCCACGTGAC CGAGGTGATG ATCCTCACGA CACAGGGCGC AGAGATCCCC
CTCTCAGAGG TCGCGGAGAT CCAGGTGACG CAAGGAGTCA GCGGGATCAG ACGTGAAAAT
GGCAACCGCA CCATCAACGT CTGGGCCTCG GTGGACGCCT CTCAGGCCGA GCCATTTAAG
CTAGCCCAGG ACATTCGTGA TAACTTTATC CCTGAGCTGC TGCGTCAGTA TCCTAGGGTG
AAAAGTGAGG TGGCGGGTAA CATTCAGGAG CAGATCGACA GCGCCAATAC CCAGATGCGT
AACTTCATCA TCTCGCTGCT GGTGATCTAC AGCCTGTTGG CCGTTCCACT TAAGTCCTAT
GTGCAGCCAA TGATGATCAT GTCAGTGATC CCCTTTGGCA TCATAGGCTC GGTGCTTGGC
CACATGTTGC TTGGGATAGA CCTAAGCGCC CTCTCCCTCT TCGGCATCAT TGCCGCCGCG
GGCGTGGTGG TGAATGACTC TTTGGTGATG GTGGATTACA TCAACCGCGC CCGATTGGCC
GGTATCAGCA TGAAGGTTGC CGTGATTGAG GCAGGTTGTC GTCGTTTCAG GGCGATCCTG
CTCACCTCGC TGACCACCTT TATCGGCCTG GTACCCATCA TGAGCGAGAC CAGCATGCAG
GCGCAGATGG TGATCCCTAT GGCGGTGTCG CTCGCCTTCG GCGTACTGTT CGCCACCATA
GTGACTCTGG TACTTATTCC ATGTCTCTAT GTGGCGATCG AAGATACCAA GTCTGCGTTT
AGTTGGATAT ACAACCGAAT TGCCGGCGTT AAGGTGAACC AGCCTGTGGT TTCAGAGCAG
TAG
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| Protein sequence | MPDPNKGMIA WFARNSVAAN LLMIIIIIGG LLTASTIRKQ FFPQTETNWV EFSAFYPGAA
PQEVEEGITI KVEEALERVQ GLKRVITYSN RNSASGYFRI EDSYDPQVVL DEIKSEIDSI
SSFPDGMERP RVERIKNRQE VFYISLYGDL PPKKLKEFGE KIHDELMQLP LVNITEFYGG
LDYEMSIEVS KDKLREYNLS FNDVAKAVRG YSRNMSAGQI KAENGYISLR VQNQAYVGYE
FENLPLITLE DGTKLLLGDV ANVVDGFEEG IQYSKFNGKN SVTFFVGASN DQSMTDVAKV
VNQYVEDKQA SLPQGLNLET WVDMTYYLQG RLDLMLDSMK SGAILVFIML ALFLRVRLAF
WVMMGLPVCF LGTLLLMPTA MIDVTINVIS LFAFILVLGI VVDDAIVMGE SAHTECEEKG
QSIDNVIRGV KKVAMPATFG VLTTIAAFLP ITMDDGPSSA FGQSIGYVVI LCLLFSLVES
KLILPAHLAK MKHKTQVKPG SKNPINLLRI GVNYLQAKVD NGLQFVIYRL YKPSLTLSVK
YRYMIIALFI SLILVCAGLY SGGILRYVGQ PKIPHDFPRI SVEMNLDSSE QATLSAALAI
EAALHKVDDQ LEQEFGQRMI ADMQVDLQGR TRAQVMTKLV TPELRPIDTF ALAERWRAAM
PQIPGVKSFN IQDNLFGGGR DDGDISFRLE GKDEAQLIAA AKALKAKLNS LQGVGDVNDS
RQSSAKEVQF SLKPLANSVG LTLADVASQV SASFYGLEAQ RILRNGEEIK VMLRYPEEQR
NSIAHVTEVM ILTTQGAEIP LSEVAEIQVT QGVSGIRREN GNRTINVWAS VDASQAEPFK
LAQDIRDNFI PELLRQYPRV KSEVAGNIQE QIDSANTQMR NFIISLLVIY SLLAVPLKSY
VQPMMIMSVI PFGIIGSVLG HMLLGIDLSA LSLFGIIAAA GVVVNDSLVM VDYINRARLA
GISMKVAVIE AGCRRFRAIL LTSLTTFIGL VPIMSETSMQ AQMVIPMAVS LAFGVLFATI
VTLVLIPCLY VAIEDTKSAF SWIYNRIAGV KVNQPVVSEQ
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