| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1996 |
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| Symbol | |
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| ID | 4920960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2307800 |
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| End bp | 2308423 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640163565 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094121 |
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| Protein GI | 127512924 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0584837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAAG GCCTGCTGTG TAGTTGCCTT CTTCTTGCAA CGAGTGTTGT TCAGGCAACG
CCCATCTCTC TCGACTATCA AGGCTTCTAT CAAAGAATGA AGCAGATGAA CAAAGGCAAC
TATTCGCTTA TCGATATCGC CTTTTCTGTC CCTAAGGCGA ATGGCTGTGT TATCGAGAGT
GGCTCAATCA CCACGGAGAA ACGCTATTAT CCGTTGACGA TATCCAACGA CCAACGCCTC
TATATTCCAT TCGATGAGAC CCTAAAGTCC GAGCGTGCTC TGATCAATCT GCAGATGAAA
AATGATGCCA CCCGTTGCGG TGTCGCCATG CAGATCCGCG CCAAATCACC ATCGCGAGAC
TATAGCCAGG CAGCACTTAG CGAGCTGGCA ATTCAGATGG ATGAGTTGCT CAAGCAGATG
CAGGGCTTTC CGATGAAATA TTTCGCCGAG GATATTGTCG GGGTCAGCTT TGAGTTTGCG
GGTAAGGCGC AGGTGACGAT CGATGGTAAA GCGCAGCAGG TTGACGGCAT CTATCGCTTA
GCAAGTGATG AAATAAGTGC GCTAACTAAG ATAAGTTTTA GTGAAACGCC TAAGGTGGTC
AGCCCTTGGG TGAAAAGCTC CTAG
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| Protein sequence | MNKGLLCSCL LLATSVVQAT PISLDYQGFY QRMKQMNKGN YSLIDIAFSV PKANGCVIES
GSITTEKRYY PLTISNDQRL YIPFDETLKS ERALINLQMK NDATRCGVAM QIRAKSPSRD
YSQAALSELA IQMDELLKQM QGFPMKYFAE DIVGVSFEFA GKAQVTIDGK AQQVDGIYRL
ASDEISALTK ISFSETPKVV SPWVKSS
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