| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1972 |
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| Symbol | |
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| ID | 4921404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2279858 |
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| End bp | 2281207 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640163541 |
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| Product | FMN-binding domain-containing protein |
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| Protein accession | YP_001094097 |
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| Protein GI | 127512900 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3976] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.195856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATGT CCAATAAATT AAAAAAAACA ATCATAGTAT CGAGTATTGG GTTGGCAACA
TTATCTGCCC TTGGCTGTGC CTCTTCACTT ACTCAAGGCA AATACGTTGA CGGCACTCAT
CTGGTTCAGG CCAAAGGAAA GAAAAGCCAA ATCGTATTAG AGGTTAAGGT CGATCAGGGC
AAGATAGTCG ATATCAAGAC CAAGTCTCAC AAGGAGACAG AGTCACTCTA TCTAAATGCG
GAGCGTCTAC TGCCGAGGAT TGTTGCCAAC AATGGCCATG AAGGCATAGA TGCGGTATCA
GGCGCCACTT ACTCCTCCAA CGGCATTCTA AAAGCGGTCA ATGATCTGCC CCGCGCTAGC
AGTGTGCAAC CCGAATATGT GGCCGTTGGA GCGAAAGAGG AGCAAGGCGA CGATTTCAAG
CTCAAGTGGT CTATTCAGCC TAAGCTAGGT CTGCTAGTAG GAGATTATTA CTACGAGGAG
GCGAGATTCC GTCAGGGTCA CATGGGTAGC ATGACCATAG TGACCAACAG CCAGGATAGA
AACGACGTTA TTTTGGCTGA GTTCAACGAG AGCGGCCGAC CAAACTATTA CACGCGCCTG
TATCAAGACG TCCCTAAACG CATGTCTGAA TATAACTTTT CGATGGGAAA GAAGAAGGGC
ACTGCCTGGG TACAGTCTGC CTTGACCATG GAAAAGCTCA TGGTTGAACA AGATAAATTA
ACCTTCGAAC CCAATCCTAA TCATGATCCT AAGTTAGCCA ACAAGTTAAA AGAACCTAAT
CGACTCAAAT ATTTAGGAAT CGACGTCGTT GCCGGTGCCT CTAACAGCAT TCAACAGTCG
ATGATCCCAC TGACGGCAAA GATCCATCAC AAGATTCATG GCGAAGGCAC TAGGCTGAAA
TTTTATCAAC TTGCTGAAAA ACTCGTTAAC GAAAAAGGCC GCTGGACTGG TATCACGGCG
ATGTTGCGCC TAGTGGTAGA CCCAGCCTCA AAGCAGATCA TTAAGGCCCA TTTTGACGAG
ATCTTCGCAG ATGAGAAGGC ACAGATTCAG GATGCTTCAC TGAAGAAATT CTATCGCCAG
TCGAAGTACG ACTCTATCAA CTATTCAGAG CCTGCACGCA TAGGTTTTAA CGTGATGATC
GATGCGTTAA ATGCGCACCT ACAAGCCGGA GGTTCGCTAT TTGACATCAA TGACCTGCCG
GCGACTGGAG ATAGCGGAAA CTATGCGGCG ACGGGATTCA CCAAACGCTC TAGCTCTTGG
GATATCTACC TTAACCAGGC CGAGCAACTC TATAAAAAGA TGCGTCTAGA TGGTGTGATC
GCTGAGCACA AGCATCCAGC AGCTAAATAA
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| Protein sequence | MAMSNKLKKT IIVSSIGLAT LSALGCASSL TQGKYVDGTH LVQAKGKKSQ IVLEVKVDQG
KIVDIKTKSH KETESLYLNA ERLLPRIVAN NGHEGIDAVS GATYSSNGIL KAVNDLPRAS
SVQPEYVAVG AKEEQGDDFK LKWSIQPKLG LLVGDYYYEE ARFRQGHMGS MTIVTNSQDR
NDVILAEFNE SGRPNYYTRL YQDVPKRMSE YNFSMGKKKG TAWVQSALTM EKLMVEQDKL
TFEPNPNHDP KLANKLKEPN RLKYLGIDVV AGASNSIQQS MIPLTAKIHH KIHGEGTRLK
FYQLAEKLVN EKGRWTGITA MLRLVVDPAS KQIIKAHFDE IFADEKAQIQ DASLKKFYRQ
SKYDSINYSE PARIGFNVMI DALNAHLQAG GSLFDINDLP ATGDSGNYAA TGFTKRSSSW
DIYLNQAEQL YKKMRLDGVI AEHKHPAAK
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