| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1950 |
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| Symbol | |
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| ID | 4920983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2254562 |
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| End bp | 2255656 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163519 |
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| Product | phosphoserine aminotransferase |
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| Protein accession | YP_001094075 |
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| Protein GI | 162139867 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1932] Phosphoserine aminotransferase |
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| TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.471166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00532682 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCGCGA CATATAATTT CTGTGCAGGG CCGGCCATGT TACCTCAGCC CGTGATGCAA
AAAGCACAAG AGGAGTTATT GGATTGGAAC GGGCAGGGTG TCTCCGTGAT GGAGATCAGC
CATCGTAGTA AAGAGTTTAT CGCGCTTACC GAGCAGGCCG AGGCCGACAT CAGAGACTTG
ATGAATATTC CCAGCAACTA CCATGTGCTC TTTATGCATG GTGGTGGTCG CGGACAGTTC
GCCGCTGTCG TGAATAATTT ATTGGGTGAA CAGGGTAAGG CCCTCTATCT GGTCGATGGC
AGCTGGTCAT CTGCGGCGGT TGAAGAAGCC AAAAAACTGG CCGGCGACGC CCAAATAGAT
ACATTAAACA TTGTCGAAAA AACTAATGGT ATCAGCCGTA TCGTGGTGCC AGATCTTAAC
GAAATCAAAC AGGATTATCG TTACCTGCAC TACTGCCCAA ATGAGACGGT AGATGGTATC
GAAATTTTTG AAGAGATAAA TTCGCCTTGG CCGATTGTTG CCGACATGTC CTCAAACATC
ATGTCTCGCG AGATTGATGT CAGCCGCTAT GGACTCATCT ATGCTGGTGC GCAGAAGAAT
ATCGGGCCAT CGGGCTTAAG CATTGTCATC GTTCGCGACG ACTTACTTGC GTATCCGCAG
CTCACCCAGG CGTCTATCAT GGACTATCGC CTGGCCGTAA AACATGACTC CATGTTCAAC
ACGCCGCCGA CTTTTGCCTG GTATCTGGCT GCCGAAGTTT TCAAATGGCT CAAGGCTCAG
GGTGGGGTGG CGGAGGTTGC CAAGGTCAAT GATCGTAAGG CCGAGACGCT CTATGCCTAT
ATCGACAGCG GCGATTTCTA TGAAAACCGC GTCGCGGTTG CTAACCGCTC GAAAATGAAC
GTGACCTTCT ATCTGAAAGA TGAGTCGTTG AACGAGCCGT TTTTGGCAGA AGCTAAGGCC
GCAGGCTTAG TAGCGCTAAA GGGTCATCGC AGTGTCGGCG GTATGCGCGC CAGCCTCTAC
AACGCCATGC CATTAGTGGG TGTCGAGGCC TTGGTGAGCT TCATGAAAGC CTTCGCCGAA
AAACACGTTG CCTAG
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| Protein sequence | MSATYNFCAG PAMLPQPVMQ KAQEELLDWN GQGVSVMEIS HRSKEFIALT EQAEADIRDL
MNIPSNYHVL FMHGGGRGQF AAVVNNLLGE QGKALYLVDG SWSSAAVEEA KKLAGDAQID
TLNIVEKTNG ISRIVVPDLN EIKQDYRYLH YCPNETVDGI EIFEEINSPW PIVADMSSNI
MSREIDVSRY GLIYAGAQKN IGPSGLSIVI VRDDLLAYPQ LTQASIMDYR LAVKHDSMFN
TPPTFAWYLA AEVFKWLKAQ GGVAEVAKVN DRKAETLYAY IDSGDFYENR VAVANRSKMN
VTFYLKDESL NEPFLAEAKA AGLVALKGHR SVGGMRASLY NAMPLVGVEA LVSFMKAFAE
KHVA
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