| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1944 |
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| Symbol | |
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| ID | 4921478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2245730 |
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| End bp | 2246110 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163513 |
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| Product | ferredoxin |
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| Protein accession | YP_001094069 |
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| Protein GI | 127512872 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0633] Ferredoxin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.241389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0118299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAGTGA GTTTGCCGAC TTTGATCTCT AACAAGACGG TCTTTAGTCA GGCTGTTTTT
AAGAAGGCTC CGATCGTGAG CCTTCATGGA CAGCCTGTAC TCCTCTATAC CAATAACCAC
CAGAGCCTGT TAGCGGCACT CGAGCAGAAG AAGGTTCGTA TCTTCTCTGA GTGTCGTAAC
GGCTTTTGTG GTGCCTGCAA GACCAAGATT AATCGCGGTA GCGTCGTCTA CCACACGGAG
CCACTGGTCG AACTGGAAGC CGATGAGTGT CTGCCCTGCT GCTGTCATCC CGACGGCGAT
CTCGACCTGG CACTTTCTGC CCAAGGTGCC GAGGTGGTAT CGACTCATAC ATCTGAGCCT
GTTGCCTGCA CCGCCGAATA G
|
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| Protein sequence | MRVSLPTLIS NKTVFSQAVF KKAPIVSLHG QPVLLYTNNH QSLLAALEQK KVRIFSECRN
GFCGACKTKI NRGSVVYHTE PLVELEADEC LPCCCHPDGD LDLALSAQGA EVVSTHTSEP
VACTAE
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