| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1933 |
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| Symbol | |
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| ID | 4921467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2232895 |
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| End bp | 2233773 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163502 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_001094058 |
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| Protein GI | 127512861 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3021] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.133794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0108243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCAAA ACCGATCCAA TTCGCCGCGT TTACTGCGCT GGGGGATAAA ATCATTACTA
TTATTACTCC TAAGTGCGGC TGCTTATGTG GCAGTGGTGA CCTATCTTAA CGGCGAGCCA
GAGGTGATGA TGAGTGAGGT TGAACCGGTT TTTGTCTCCC AATGTGTTGC CGCGCACACT
AGTCAGGCGC TGGATAATGA TGGGCTACTC AGAGTCGGTG TGTGGAACAT CTATAAGCAG
CAAAAGCGTG GCTGGCAGCA GGCTCTCAGT AAGATCGCCG AACGTAGCGA GATCATGTTG
TTGCAGGAAG CTAAGTTAAA CGCAGGCTTT AATCAGTATC TTAATGGCTC TAGCCTGCAT
CTGGTGATGG CTAAGGCGTT CTCGCTGCTG AAATCTCCCG TAGGGGTAAT GAACCTCGCC
ACAGAGCAGG CGCGCGATGC CTGTGCCTAT CATGCGGTCG AGCCCTGGAT CCGTTTTGCC
AAATCGACCC TCATCTCGCG TTACTCCCTG TCCAATGGGC AGACCCTACT GGTGGTCAAT
CTGCACGGCA TCAACTTCGA CTGGCAGCTT AAGAGCTATC GCGCCCAGTG GCAGCAGATA
GTACAGAAGA TTAATCTGCA TCAGGGGCCA GTGATCTTAG GCGGCGATTT TAATACCTGG
CGGGGTCAGC GTATGGCCTA TATCGAGCAG CTCGCCCACC AGCTCAGGCT GAAGGAGGCG
GTATACGAAG AAGACAAGCG TCAGCGAGTG TTCGGCTTGC CGCTGGATCA TCTCTATTAT
CGTGGCCTGA ATCTAGTTGC GGCCGAGTCT TTTACCAGCC AGGCATCGGA TCACAATCCC
ATCTGGGCTG AGTTCAGGTT AAAGCCAGTA GCACATTAG
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| Protein sequence | MSQNRSNSPR LLRWGIKSLL LLLLSAAAYV AVVTYLNGEP EVMMSEVEPV FVSQCVAAHT
SQALDNDGLL RVGVWNIYKQ QKRGWQQALS KIAERSEIML LQEAKLNAGF NQYLNGSSLH
LVMAKAFSLL KSPVGVMNLA TEQARDACAY HAVEPWIRFA KSTLISRYSL SNGQTLLVVN
LHGINFDWQL KSYRAQWQQI VQKINLHQGP VILGGDFNTW RGQRMAYIEQ LAHQLRLKEA
VYEEDKRQRV FGLPLDHLYY RGLNLVAAES FTSQASDHNP IWAEFRLKPV AH
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