Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1906 |
Symbol | |
ID | 4921628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2203180 |
End bp | 2203593 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640163474 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001094031 |
Protein GI | 127512834 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.537884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000285957 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAGTGA GAATAAGCAA CCGGGCACCT GATCTCGAAG AGTTCATGAC TTTGCGAACT GCAGTTGGCT GGACAAACCC CAAGCCTGGA CTGGTTCAAC AAAGCCTGAA TAACTCGCTT TTTCACGTTT GCGCCCATAT CGATTCGAAG CTTGTGGGTT ACGGCCGTAT TGTGGGCGAC GGCGCTATGT ATTTTTATCT GCAAGACATA GTGATCTCAC CCGAGTATCA AAACCAAGGT GTAGGCAGAT CTATTATGCA AGAGATAGAG AGCTTTCTTG CAGATACCGC CATGCCCGGC GCCACCATTG GGCTGTTGGC CGCCTGCGGT AAGGAAGCGT TTTACTCTCG ATTTGGCTAC AACCCCAGAA CCGGGGAATC TCTCGGACTA GGCATGTGCA AATTTGTCGA ATGA
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Protein sequence | MEVRISNRAP DLEEFMTLRT AVGWTNPKPG LVQQSLNNSL FHVCAHIDSK LVGYGRIVGD GAMYFYLQDI VISPEYQNQG VGRSIMQEIE SFLADTAMPG ATIGLLAACG KEAFYSRFGY NPRTGESLGL GMCKFVE
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