Gene Shew_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1906 
Symbol 
ID4921628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2203180 
End bp2203593 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content50% 
IMG OID640163474 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001094031 
Protein GI127512834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.537884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000285957 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGTGA GAATAAGCAA CCGGGCACCT GATCTCGAAG AGTTCATGAC TTTGCGAACT 
GCAGTTGGCT GGACAAACCC CAAGCCTGGA CTGGTTCAAC AAAGCCTGAA TAACTCGCTT
TTTCACGTTT GCGCCCATAT CGATTCGAAG CTTGTGGGTT ACGGCCGTAT TGTGGGCGAC
GGCGCTATGT ATTTTTATCT GCAAGACATA GTGATCTCAC CCGAGTATCA AAACCAAGGT
GTAGGCAGAT CTATTATGCA AGAGATAGAG AGCTTTCTTG CAGATACCGC CATGCCCGGC
GCCACCATTG GGCTGTTGGC CGCCTGCGGT AAGGAAGCGT TTTACTCTCG ATTTGGCTAC
AACCCCAGAA CCGGGGAATC TCTCGGACTA GGCATGTGCA AATTTGTCGA ATGA
 
Protein sequence
MEVRISNRAP DLEEFMTLRT AVGWTNPKPG LVQQSLNNSL FHVCAHIDSK LVGYGRIVGD 
GAMYFYLQDI VISPEYQNQG VGRSIMQEIE SFLADTAMPG ATIGLLAACG KEAFYSRFGY
NPRTGESLGL GMCKFVE