| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1895 |
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| Symbol | |
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| ID | 4921775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2189873 |
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| End bp | 2190442 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163463 |
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| Product | redoxin domain-containing protein |
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| Protein accession | YP_001094020 |
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| Protein GI | 127512823 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.132277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAGAG AACAGAAGAT GCAAGGCGTT CAGCCGTCTG TAGAGGGGAG AATGAGATCC
CCCATGATGG CCAAGCTTCT TTGGCTATCG ATGGCAATGC TCGTTAGCTT GTCTATGGTG
CAGCCGAGTC ACGCTGCGCC GCGCTTGGAT TTGAGCGCCA AGACACAAAG CGGCGAGCTG
GTGTCACTTG AGTCCTATAA GGGCAAGGTG GTCTATGTGG ATTTCTGGGC CTCCTGGTGC
GCACCTTGTC GTGACTCCTT TCCCTGGATG GAGCTGATGC ATCAACGCTA TGGCGACAAA
GGGCTTGCGA TCGTGGCGAT CAATCTCGAT GAAGAGAGTG AGATGGCTGG GCCCTTTCTG
GCCGATTTCA AAACTAGCTT CGATATCCTC TACGATCCCA AGGGGGAGAT GGCCGGCCAC
TTTAATCTGC AGGGGATGCC CAGCAGTTAT CTGTTTGATG CTGAGGGAAA TCTGGTCAGC
GAGCATCTGG GCTTCTTCAA GTCCAAGCAA GCTGCCGTAG AGCAGGAGAT CCAATCTTTG
TTGAAGAAGA GGTCAGCCGA TGCGAACTGA
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| Protein sequence | MSREQKMQGV QPSVEGRMRS PMMAKLLWLS MAMLVSLSMV QPSHAAPRLD LSAKTQSGEL
VSLESYKGKV VYVDFWASWC APCRDSFPWM ELMHQRYGDK GLAIVAINLD EESEMAGPFL
ADFKTSFDIL YDPKGEMAGH FNLQGMPSSY LFDAEGNLVS EHLGFFKSKQ AAVEQEIQSL
LKKRSADAN
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