| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1876 |
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| Symbol | |
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| ID | 4922128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2159901 |
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| End bp | 2162024 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163444 |
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| Product | alpha-glucosidase |
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| Protein accession | YP_001094001 |
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| Protein GI | 127512804 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.507439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTGCA CCTCGACTCA CTTAACAAGC CACCAAGCGA GCCCCCACTC CAGATCCCAG
CCCAGATCGC CGTTTCCGAC CACCCTATCG GCACTCACCC TTGCCATAGC GGCGACCGGC
ATGATGCTGC CAAGCACTGG CCTGGCCAAG ACAATCTCTC TGACCTCGCC TGACAAGCAG
ATCGTGGTCA GCCTGAGCGA TGATGATCAA ACGCCGCGCT ACAGCGTCAG CTTTCATGGT
AAGAAGGTGA TCGAACCCTC CAAGCTTGGA ATTGTGTTTG AGTCTCTTGG GGAGTTTGGC
ACTGACTTTA GCATTCAAGA GGTCAAGCGC AGCCAGGCCG ATGAGCGCTG GCAACAGCCT
TGGGGCGAAC GTGAATGGGT TGTCGATAAA CACAATGGCC TGACAGCCAC CCTGAGTAAT
GGTCAATATC GCTTTGTGGT CGAGTTCAAG GTGTTCGATG ATGGCCTAGG CTTTCGCTAC
CAGATGCCGA AGCAAGGCGA TTTAGACAAA CTCAACATCA CTTCGGAGCT CACCGAATTC
ACCCTGCCGC AACCCGAGAA CGTCACCGCC TGGTGGATCC CGGCGCGTGG CTGGAACCGC
TACGAGTACC TGTATCAGAA GACGCCGCTC AAACAGGTCG ATAGGGTTCA TACCCCCTTC
ACCTTCACCC TGAGCGATGG GGTGCACATG AGCATCCACG AAGCGGCGCT GGTGGACTAC
GCTGCCATGA CGCTGGATCA GCGCAGAGAC GGCACCCTGC GCGCCGATCT CACCCCTTGG
TCAGATGGCA TGCGCGTCAA GACCCAGGCG GGCTTTAGTA CGCCTTGGCG CACCATACAG
ATCGCCGACA AGGCCACCGG CCTGCTGAAC TCAGATCTTA TCCTCAATCT CAACGAGCCT
AATAAGCTTG GGGATGTGGA TTGGGTCGAG CCCGGCAAAT ATGTGGGGAT TTGGTGGGGC
ATGCACCTCA ACGAGAACAC TTGGGGCTCA GGCGACAAAC ACGGTGCCAC CACCTCAGAG
ACCAAACGCT ACATGGATTT TGCCGCCGAG AACGGCTTCG CCGGCGTATT GGTAGAAGGC
TGGAACATAG GTTGGGACGG CAGCTGGTTC CACAACGGCG ACGTATTCAG CTTCACCCAG
GCCTACCCAG ACTTCGATCT CCCTGAGATC TCTGCCTATG GCGCCAGCAA GGGCGTTCGC
CTGATCGGTC ATCACGAGAC CTCTGGCTCG GTCACCAACT ATCGCAAGCA GATGAGCGAT
GCCTATGATC TCTATCAGCA ATATGGCGTC ACTCAGGTGA AGACCGGCTA TGTGGCCGAT
GGCGGTGATA TCAAGCGCGT GGATGAACAA GGCATAGTGC GCCACGAATG GCATGATGGC
CAGTTTATGG TCAACGAATA TCTGCATAGC GTCACCGAAG CGGCCAAGCG CCACATCAGC
ATCAATACCC ATGAGCCGAT TAAAGATACC GGCCTGCGCC GCACCTATCC AAACTGGATC
GCCCGCGAAG GCGCCCGTGG TCAGGAGTTT AACGCTTGGG GCACGCCACC TAATAATCCG
TCGCACACCA CCACCCTGGC CTACACCCGC ATGTTGGCTG GCCCTATGGA CTTCACCCCG
GGGATCTTCG ACCTGGCCCC CAAAGGCCTG GATGCGGTTA ACCGGGTGCA GACCACACTG
ACCAAACAGC TGGCCCTCTA TGTGGTGCTC TACAGCCCGA TCCAGATGGC CGCCGATCTG
CCCCGCAACT ACAAGCAGCA TCCCGATGCC TTTAAGTTTA TTCGGGATGT GCCCACCGAC
TGGGCCCAGA GTATCGCCCT GGCCGGTGAG GTAGGTGAAT ATGTGGCCTT TGCCCGTCAG
GAGCGTGGTG GCAAGAGTCA GGGCAAGGAC TGGTACTTGG GCGCGATCAC CGACGATGAC
GCACGTGAGA TCAACATCAA GCTCGATTTC CTCGACCCCG CCCTGAGTTA TGAGGTGCAG
ATCTACCGAG ACGGCGACAA GGCCGATTGG CGCACCAATC CCTATGACTA TGTGATTGAG
ACCCAAAAGG TGAATAGCAA GCAGCAGCTG ACGTTAAAAC TTGCCAGCAG TGGCGGCGTC
GCGATTCGCT TCAAGGCGCT CTAG
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| Protein sequence | MSCTSTHLTS HQASPHSRSQ PRSPFPTTLS ALTLAIAATG MMLPSTGLAK TISLTSPDKQ
IVVSLSDDDQ TPRYSVSFHG KKVIEPSKLG IVFESLGEFG TDFSIQEVKR SQADERWQQP
WGEREWVVDK HNGLTATLSN GQYRFVVEFK VFDDGLGFRY QMPKQGDLDK LNITSELTEF
TLPQPENVTA WWIPARGWNR YEYLYQKTPL KQVDRVHTPF TFTLSDGVHM SIHEAALVDY
AAMTLDQRRD GTLRADLTPW SDGMRVKTQA GFSTPWRTIQ IADKATGLLN SDLILNLNEP
NKLGDVDWVE PGKYVGIWWG MHLNENTWGS GDKHGATTSE TKRYMDFAAE NGFAGVLVEG
WNIGWDGSWF HNGDVFSFTQ AYPDFDLPEI SAYGASKGVR LIGHHETSGS VTNYRKQMSD
AYDLYQQYGV TQVKTGYVAD GGDIKRVDEQ GIVRHEWHDG QFMVNEYLHS VTEAAKRHIS
INTHEPIKDT GLRRTYPNWI AREGARGQEF NAWGTPPNNP SHTTTLAYTR MLAGPMDFTP
GIFDLAPKGL DAVNRVQTTL TKQLALYVVL YSPIQMAADL PRNYKQHPDA FKFIRDVPTD
WAQSIALAGE VGEYVAFARQ ERGGKSQGKD WYLGAITDDD AREINIKLDF LDPALSYEVQ
IYRDGDKADW RTNPYDYVIE TQKVNSKQQL TLKLASSGGV AIRFKAL
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