| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1841 |
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| Symbol | |
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| ID | 4924314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2117114 |
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| End bp | 2118571 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163409 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_001093966 |
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| Protein GI | 127512769 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.891186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.107833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTAAAG TTAACAAAGC AAAATCCCTG GTTGCCGGCG CCTTGTCGAT GGCCCTGTTC
TCTATCGCCC CCTTAGGCTT TGCCAACAAC GATCTGCCAG ATCTTGGCAC CGCGGCGGTG
AACACCTTCA GCCTGGAAAA AGAAAACAGC TATGGCGACG CCTATATGCG GGTGATCCGC
TCATCGGCGC CCATGCTTAA CGATCCCGTA CTCAATCAAT ACCTGACCGA GCTGGGTAAC
CGCCTGGTAG CCCACGCAAC TGGTGTAAAG ACCCCCTTCT ATTTCTTCCT GCTTAGAAAC
GATGAGATCA ACGCCTTCGC CTTCTTCGGC GGCCATGTGG GGGTTCATAC CGGCTTGTTT
CTCAACGCCG ATAACGAGAG CCAGCTGGCC TCGGTATTAG GCCACGAGAT CACCCACGTG
ACCCAACGGC ACCTGGCGCG TTCTCTCGAG GCGCAGCAGA AGAGCTCTCC GGCGACAATA
GCGGGTCTAC TAGGCGCTAT CTTGCTCACT ATTGCCGTGC CTCAGGTGGG CATGGCTGCC
ATGGCGACGA CTCAGGCCTT AGCGACTCAG GCGCAGATCA ACTACACCCG CCTGCACGAG
AAAGAAGCGG ACCGTATCGG CATGCAGATC TTGGTCGACG CTGGCTTCGA TCCGAACGGC
GCGGCGGACT TCTTCTCTAA GCTGGCCACA CGCTATCGTT TTACCACTAA GCCGCCGCAG
ATGTTGCTGA CGCACCCCTT GCCCGAATCG CGAATTGCCG AGGCAAGAAA CCGGGCGGCG
CAATATCCCC ACAGGTATGT GGCCGATAAT CTGGATTTTC AGCTAGCCAA GGCGCGTATT
CAGGTGCGCT TCTCTAGCTA TAGCGAAGAG GCGGCGCTGG CGCTATTTAA CGACCAGATA
AGAAAGAACA GCTACCAATT TGAAGAGGCG GCCCTGTACG GTAAGGCGCT TGCTCTGCTG
CGCGCCGAGA AGGCCAAGGA ATCAGAGATC ATCATAGACA AATTGCTCGC TAAAGATCCC
AATAACCTCT TTTATATCGA CACTAAGACA GATCTTCTGC TGGAGCGCCA TGAGCATCAA
CAGGCGATCG ATCTGCTGAC CCGTGAGCGC AAACTCAAGC CCACCTCTCA AGTGATCAAC
ATCAACCTGG CCAACGCGCT TATCGAAAAT GGTAAGGCCA AACAGGCCAT TCCCCTGCTG
GAAGATATGA TCTTCCTCGA TAAGCAGAAT CAATTGCCGC TACAGTTGCT GAGCGATGCC
TACAAGCAGA CAGGTAACCG CGCCATGGAG CATTTTGCCA AGGCGGAAAC CATGGCGCTG
GCGGCAGACT ATGATGGCGC CATAGATCAA CTCAACTTTG CTTACCGGCT GTCGGAGAAA
AATCCGCTGC AACTGGCTAA GATCGAGGCC AGGATCCGTC AGTTCAAACA GTCGAAGAAA
CAACTCGAAC TGCTTTAA
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| Protein sequence | MSKVNKAKSL VAGALSMALF SIAPLGFANN DLPDLGTAAV NTFSLEKENS YGDAYMRVIR
SSAPMLNDPV LNQYLTELGN RLVAHATGVK TPFYFFLLRN DEINAFAFFG GHVGVHTGLF
LNADNESQLA SVLGHEITHV TQRHLARSLE AQQKSSPATI AGLLGAILLT IAVPQVGMAA
MATTQALATQ AQINYTRLHE KEADRIGMQI LVDAGFDPNG AADFFSKLAT RYRFTTKPPQ
MLLTHPLPES RIAEARNRAA QYPHRYVADN LDFQLAKARI QVRFSSYSEE AALALFNDQI
RKNSYQFEEA ALYGKALALL RAEKAKESEI IIDKLLAKDP NNLFYIDTKT DLLLERHEHQ
QAIDLLTRER KLKPTSQVIN INLANALIEN GKAKQAIPLL EDMIFLDKQN QLPLQLLSDA
YKQTGNRAME HFAKAETMAL AADYDGAIDQ LNFAYRLSEK NPLQLAKIEA RIRQFKQSKK
QLELL
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