| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1792 |
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| Symbol | |
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| ID | 4924304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2051283 |
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| End bp | 2052038 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163353 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001093917 |
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| Protein GI | 127512720 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00059964 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC AGATCATTGC CGCATTTATC AGTGTTTCGT TATTTGGCAG CTCAATGGCT
TTCGCTGCCC CCGCAACTCA AGCGACTCAA AGTACAAACA ACAGCTCGGC CGATGAAGAG
GCGCTTATCG GTGTGGGCTC TGGAATAGTG CTGGGCGCCG TGGTTGCGGG TCCTGTGGGG
GCCATTATCG GCGCCTTCAC CGGCGGCATG ATAGGCCAGA CGGTGGCCAA CGACAGCGAG
ATCAAACAGC AGCAGGCCAC GTTAGCTGAG CAGGAGAGCC GCATGATGGC GCTCAAGCAG
CAAAATGAGG CGCTGCTGAC GGTGCAGCAG GAGTATCAAG AGGCCAAGGT GGAACTGGCA
CAGCTTAGAC AGCATCAGGG CACCCGTTTG GAAGAGCTGG CCCTGGGGCT CAACGTCCAG
TTTAAGACGG GCTCATCTAC CGTCGAGCCG CACTTTCAGA GCCAGCTCAA CGAGGTGGCC
GATGCCATGG CGATCTCGCC GCAGCTGAAA TTAGATCTCA CCGGTTACGC CGATCGCCGC
GGTGACAGCA GTTACAACCA GGCCCTGTCA GAGCAGCGCG TGGCCGAGGT GAGAAGTTAC
CTGGTATCTA AAGGCGTGGA TGAGGCCAGG CTCGATGCCA AGGCCTATGG TGCCAGCGCG
CCGGTGAAGG ATGAGCAGAG CTTCGAAAAT GACTTCTTTG ATCGCCGCGT CACCATCAAG
TTGCTGCCTG GCGATACCGC CCTGGCATCT AACTAG
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| Protein sequence | MKKQIIAAFI SVSLFGSSMA FAAPATQATQ STNNSSADEE ALIGVGSGIV LGAVVAGPVG
AIIGAFTGGM IGQTVANDSE IKQQQATLAE QESRMMALKQ QNEALLTVQQ EYQEAKVELA
QLRQHQGTRL EELALGLNVQ FKTGSSTVEP HFQSQLNEVA DAMAISPQLK LDLTGYADRR
GDSSYNQALS EQRVAEVRSY LVSKGVDEAR LDAKAYGASA PVKDEQSFEN DFFDRRVTIK
LLPGDTALAS N
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