| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1790 |
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| Symbol | |
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| ID | 4924402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2048197 |
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| End bp | 2050368 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163351 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001093915 |
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| Protein GI | 127512718 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0621858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAATC TGCCCATCGG CCTGCGCACT AAGGTCGCCG TACTCTCCCT GTTCCTGCTC
TGCCTGCCTT GGCTTGGCTA TCAATATGTG TGGGAGATGG AGAAATACCT GCGCCACGGC
CAGGAAAAGA CACTGGAAGG CACCACCCAG GCCTTGGCCA CCGCCCTGCA TGAACGACCC
AAGCTGTTCG ACAAGCAGGC GAGCTTCTTG TCACAGGTAA AAAAGGGGCG GGATCTCTAC
GCCTATCCCT TGACCGGCCC TATCCATCTG GATGGCAAGC TGGGCGAATG GGCCTCAAAC
CGTCACCGCG CGGTGACCTA TGGCGCCGAT CACCAGCTGT TTAAGGCCGA TGACGGCAAG
CCACTCAATA TCAGTTTCAC CCATATGGTG GGCAAGTATG CCGGCTACCT CTATGGCTAT
TTCGAGGTGA CAGATCCTAA GGTGATCTAC CGCGGCACCA ACAGCCTGCG CATCGACAAC
AACGATCACC TGGCCATCGC TACCCTAGCG CCCGACGGCC AGTTTCGCCG TTATATCGTC
GCCACCATAC GCGACGGCTG GATCAGCGCC TTCGAGCTAC CTGCCGATCC CCGTAAGTCC
CAGCCTGTCA CCCCTGAGGT GCGCATCCAA GGCAAATGGC TGAAGACAGA GAAAGGCTAC
AATATCGAAC TGAGGATGCC GCTGGAGATG GTGGGTAGCA AGCTGGGCTT TGCCATCGTC
GATGTTAACG ACAGAAAGGC GCGTAACGTC GAGGCGATCG TCGGCACCTC GGCTACGGAT
GATGTTACCA AGCTGGGGAC TGTACTGGTG CCTTCGCCGG AGATTGAGAG CATCATCAAG
GGGATGAGCC ACAACAGCTC ACGGATCTGG GTGGTGGATC GCCACGGCCG GGTACTGGCA
AAATCCGGCG ATATCTACAG CAGCACCAAT GTATGGGCGC AGACGGCAAC CGAGCAGACA
CCAGACACCT TCTGGGGCCG CTTCAAGCAG CAGTTCCTGC ACCCGCTCTA CTATCGCATT
TTGACTACGC CACCGAAGCA CTTTGTCGAC TCGTTGAAAG ACTCTACCGT GCTGGAGGGC
AGCCATATCC GCAAGGCCCT GGCCGGTCAG TTTGGCTCCA CCTGGCGCCT CAGCCCAGAT
GGCAAGGCGG TGATCCTGGC CGCCGCCAGC CCCATCTGGA TCGACGATAC CGTGATGGGC
GTGGTGATCG CCGAGGAGAC CACCCACGGC ATTCGCACCC TGCGCAACAA GGCGCTGGAG
AAACTGTTTA ACGTGATCCT GACCGTGATG AGCATGGGCA CACTAGCGCT CTTCTTCTTC
GCCTCCAGCA TCTCCAGCCG TATCCGTAAG CTGAGGGACG ATGCCGAGCA GGCGATCGAC
AGCCAGGGGC GGATCAGAAA GGCGATTGTC GGCTCTAAGG TGCGCGACGA AATAGGCGAT
CTCAGCCGCA GTTTCGCCAG CATAGTCGGC CGACTGAGCC AATATACCCA CTATCTGGAG
AACATGTCGT CGCGCCTTGG ACATGAGCTG CGCACGCCGG TTGCCGTGGT GCGCTCGTCA
CTCGAGCACC TCAACAGCCA GGATCTGCCG CCGCAACATC AGAAGTATGT AGACCGCGCC
CACGAAGGGG TGAGCCGCCT CAACATGATC CTCAACAACA TGAGCGAGGC CACCCGTCTC
GAAGAGGCGC TAACCGACGC CGAGGTGGAC AACTTCCCCC TCTCCAAGGT GATCTCAGGG
TGTATGCAGG GCTATCAAAT GACCTATGCC AATCAGGTAT TTGAGCTAGA GATAGACAAG
GAGCCCATGA CCATGCGAGG CGTGCCTGAG TATATCGCCC AGCTGATGGA CAAGCTGATC
GCCAACGCCA TCGAGTTCAG CCAGAGCGAT ACGCCGATTA AGGTGTCACT CAAGGCCAAG
GGGCGTCAGG CATTGCTGAG TGTCAGTAAC CTGGGGCCTT CGCTGCCCGC CAACATGGGC
GAGCAGATCT TCGAGTCCAT GGTGTCTGTG CGCGCCCAGA AGGCGCAGGA CAAGCCTCAC
CTGGGTCTCG GCCTCTATAT CGCCCGCTTG ATCACCGATT TTCACAAGGG CAGCATACGC
GCAGAGAACC TGATGCAGGA TGGCCAGGCC ACCGGCGTGG TTATCCATAT CCGTCTACCG
CTGGAGGCGT AG
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| Protein sequence | MFNLPIGLRT KVAVLSLFLL CLPWLGYQYV WEMEKYLRHG QEKTLEGTTQ ALATALHERP
KLFDKQASFL SQVKKGRDLY AYPLTGPIHL DGKLGEWASN RHRAVTYGAD HQLFKADDGK
PLNISFTHMV GKYAGYLYGY FEVTDPKVIY RGTNSLRIDN NDHLAIATLA PDGQFRRYIV
ATIRDGWISA FELPADPRKS QPVTPEVRIQ GKWLKTEKGY NIELRMPLEM VGSKLGFAIV
DVNDRKARNV EAIVGTSATD DVTKLGTVLV PSPEIESIIK GMSHNSSRIW VVDRHGRVLA
KSGDIYSSTN VWAQTATEQT PDTFWGRFKQ QFLHPLYYRI LTTPPKHFVD SLKDSTVLEG
SHIRKALAGQ FGSTWRLSPD GKAVILAAAS PIWIDDTVMG VVIAEETTHG IRTLRNKALE
KLFNVILTVM SMGTLALFFF ASSISSRIRK LRDDAEQAID SQGRIRKAIV GSKVRDEIGD
LSRSFASIVG RLSQYTHYLE NMSSRLGHEL RTPVAVVRSS LEHLNSQDLP PQHQKYVDRA
HEGVSRLNMI LNNMSEATRL EEALTDAEVD NFPLSKVISG CMQGYQMTYA NQVFELEIDK
EPMTMRGVPE YIAQLMDKLI ANAIEFSQSD TPIKVSLKAK GRQALLSVSN LGPSLPANMG
EQIFESMVSV RAQKAQDKPH LGLGLYIARL ITDFHKGSIR AENLMQDGQA TGVVIHIRLP
LEA
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