| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1778 |
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| Symbol | |
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| ID | 4923480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2033905 |
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| End bp | 2034792 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163339 |
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| Product | glutamine amidotransferase |
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| Protein accession | YP_001093903 |
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| Protein GI | 127512706 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0121] Predicted glutamine amidotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0795845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCAGAT TTTTAACCTA TAGCGGCCCC AAGGCGCTGA TGTCCCCCCT GATCTTTAAG
GCCTCCAACT CGCTGGTGAT GCAGAGCAAA TACGCCCAGA AACGTAAGGT GCCCACCAAC
GCCGACGGCT TTGGCCTGGG CTGGTATCCC ACCCAGGATG ACCCTATCCC GGCGACCTTC
GTCAACGTGG ATCCCGCCTG GAGTAACCGT AACCTCAAGA TGATCGCCGA GAAGGTAGAG
ACCCAGCATT ATTTTGCCCA CGTGCGCGAT GCCTCCAAGG GGATGCCGGT CAGTCAGGCC
AACTGCCACC CCTTCTCCTG CATGCATTAC CTGTGGATGC ACAACGGCCG CCTGGATCAA
TTCGATAAGT TTCGTCGTCA GCTGCTCAAT CAGCTCTCGG ATCGCGCCTT TGCCTTGATC
AAGGGCAACA CGGACTCTGA ATATGCCTTC GCCCTCTTCA TGGACAAGCT GGAATTTGCC
GAGCAGGCCA GTCTGAGTCA GCTGGAAAAC GCGATGGAGG CGACCATCGC CTGCATCATG
CGCCTAAGAA GCGCCGCAGG CGCCGACACT AACGCCTTCA TCAACTTTGC GGTCACTGAT
GGTAAACACA CAGTAGTCAC ACGTTTCGCC ACGCTTGAGG GCGTCAAACC CGCCTCCCTC
TTCTTCGGTC GCGGCAAGGT TAACGAATGC CAGGAGGGGA TCGAATTTAT CCCCCACACG
GAAGCCGTTC AGGACGGTGA GCAGGCCTGC ATCATCATCT GCTCGGAGCC GCCAACGGAT
CAGAGCGAGC ACTGGACCAA GGTGGAGCGC AACCACATGG TGAGCGCCAT AGGCAACGAG
CGGGTGAGTC AGCGCAAGCT GGACCTGCCA TTTCAGTCCG AGCTTTAA
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| Protein sequence | MCRFLTYSGP KALMSPLIFK ASNSLVMQSK YAQKRKVPTN ADGFGLGWYP TQDDPIPATF
VNVDPAWSNR NLKMIAEKVE TQHYFAHVRD ASKGMPVSQA NCHPFSCMHY LWMHNGRLDQ
FDKFRRQLLN QLSDRAFALI KGNTDSEYAF ALFMDKLEFA EQASLSQLEN AMEATIACIM
RLRSAAGADT NAFINFAVTD GKHTVVTRFA TLEGVKPASL FFGRGKVNEC QEGIEFIPHT
EAVQDGEQAC IIICSEPPTD QSEHWTKVER NHMVSAIGNE RVSQRKLDLP FQSEL
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