| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1773 |
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| Symbol | |
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| ID | 4922442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2027904 |
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| End bp | 2028824 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163334 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001093898 |
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| Protein GI | 127512701 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGCAT TCGACTTTAA CCTGCTTCCC CTGCTGGAGG TGTTGCTGGA GGAGCAGAGC
GTCACGGCCG CCGCCGAGCG ACTGCATCTG AGCCAATCAG CGGTGAGTAA ACAGCTCAAT
AAGCTCAGAG ACTCCTTCGA CGATCAGCTG TTCGAGCGCA CCGCCCACGG CCTGCGTCCA
ACACCCAAGG CCAAGCAGCT GGGGCCGGAG ATCCGTCAGA TCTTGAGTCA GGTCTCTTCC
CTCACCCGAC CCAGCGATTT CGATCCCTCC AAGAGCCATA GACGCTTTCG GCTCGAATTG
GTAGAGACCG CCTACTCGCT AACCTACCCG CGCTTCATGC CCAAGCTGCT CAAGCAGGCA
CCTAAGATCA CCTTAGACAG CCACACCTGG CATAGCGAGA GCATGGAGCG GCTGCTACGC
TGCGATACCG ATCTTGGCAT CGCCTGCCGG GAATGGGACG AGCGCTCGCT GCAGCATGTT
AACAACCTGC CCAGCGCCCT GCGCTTCGTC GAGCTGACCC GGGATCACTC CCTCTGTCTG
GTGCGCGAGG GTCATCCCCT GCTGCAAGAG GAGTGGAACC TGAGTACCTT TTTGAAGTAT
CGCCATCTGC AGGTCACCTT CGGCGGTATA TCCCACTGGC TGCTGGACGA TGTGTTGCAG
ATGAAGCACC TCAAACGGGA CATTGCGGTC AACCTCACCG ATTTTAACAG CGCCATGCAG
CTATGCGAGC AGAGCGATCT CATCCTCTGC TCGCCCGCCA AATACGCCAA GGTGATGATG
GGGCAGTTTA AGCTGGTATC ACTGCCGATC CCCACACAGA TGGTGCCCGG CACCTATCTG
CTGCTCTGGC ATAAACATTT CGATCTCGAC CCCAGCCACC GCTGGCTCAG GGAGCTGATC
ATCGACTCGG TGCAGTCCTA A
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| Protein sequence | MKAFDFNLLP LLEVLLEEQS VTAAAERLHL SQSAVSKQLN KLRDSFDDQL FERTAHGLRP
TPKAKQLGPE IRQILSQVSS LTRPSDFDPS KSHRRFRLEL VETAYSLTYP RFMPKLLKQA
PKITLDSHTW HSESMERLLR CDTDLGIACR EWDERSLQHV NNLPSALRFV ELTRDHSLCL
VREGHPLLQE EWNLSTFLKY RHLQVTFGGI SHWLLDDVLQ MKHLKRDIAV NLTDFNSAMQ
LCEQSDLILC SPAKYAKVMM GQFKLVSLPI PTQMVPGTYL LLWHKHFDLD PSHRWLRELI
IDSVQS
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