| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1756 |
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| Symbol | |
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| ID | 4920950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2006941 |
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| End bp | 2007951 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163317 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_001093881 |
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| Protein GI | 127512684 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA ACGAAAAAAC CGTACAACTC AGTCACGGCG GTGGCGGCAA GGAGATGAAC
CGACTGATCA AGTCGATCTT CTTCAAGGCC TTCAACAACC CGATTTTGGC GAGTGAAGAA
GACGCCGCCC TGCTCCACTT CGAGGGTCAG GCCGCCTTTA CCACAGACTC CTTCACCGTG
TCGCCGCTGT TTTTCGCCGG TGGCAACATA GGCAAGCTCG CCATCGCGGG CACGGTCAAC
GATCTGGCCA TGATGGGCGC CGAACCCCAA TACCTGAGCT GCAGCTTCAT CATCGAAGAG
GGCTTTGCCA TCAAGGATCT GAAAGCCATC GTCGGTAGCA TGGCCGAGGA GCTGCACAAG
AGCGGCACCC GTATCGTCTG TGGCGACACC AAAGTCGTGC CTAAGGGCTG CGCCGATGGC
CTGTTTATCA ACACCTCCGG GGTCGGCCGC GTATTAAAAC CACAGATCTC GGTGAAAAAC
CTGCGTCCCG GCGATGCCAT CCTGGTCTCG GGCGATATCG GTCGTCACGG CGCCGCCATT
TTGATGGCCC GCGAGGGACT CACCCTGGAA TCTGAGCTGG TCAGCGACTG CGCCAACCTC
TGGCCCGTGG TCGAGCAGCT GATCGCCTGC AACATAGAGG TGCATGCCAT GCGCGACGCC
ACCCGTGGTG GCCTGGCTGC TGTGCTTAAT GAATGGGCGG GCGCCTCCAA TGTCGGCATC
AATGTCGAGG AGAGCAAAAT CCCCGTGTGT GACGAGGTAA AAGGCTTATG TGAGCTCTAT
GGCTTTGAGC CCCACGACCT GGCTAACGAA GGCACCTTCA TCCTGGCGGT ACCGGGTGAA
ATCGCCGACG GCGCACTGGA GATCATCCAG CGCTACGGCC ACTGCCAGCA GGCGGCCATC
ATAGGCCATG TGGAAGAGAC TCATCCGGGC AAAGTGGTCC TCAAGACCCC ATGGGGCAGC
AGCCGCTACC TCGACCTGCC CCAGGGTGAA TTGCTGCCAA GGATCTGTTA A
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| Protein sequence | MADNEKTVQL SHGGGGKEMN RLIKSIFFKA FNNPILASEE DAALLHFEGQ AAFTTDSFTV
SPLFFAGGNI GKLAIAGTVN DLAMMGAEPQ YLSCSFIIEE GFAIKDLKAI VGSMAEELHK
SGTRIVCGDT KVVPKGCADG LFINTSGVGR VLKPQISVKN LRPGDAILVS GDIGRHGAAI
LMAREGLTLE SELVSDCANL WPVVEQLIAC NIEVHAMRDA TRGGLAAVLN EWAGASNVGI
NVEESKIPVC DEVKGLCELY GFEPHDLANE GTFILAVPGE IADGALEIIQ RYGHCQQAAI
IGHVEETHPG KVVLKTPWGS SRYLDLPQGE LLPRIC
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