Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1725 |
Symbol | |
ID | 4923234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1979156 |
End bp | 1979707 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640163287 |
Product | curlin-associated protein |
Protein accession | YP_001093851 |
Protein GI | 127512654 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0532195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACAA ATTTGATGCA AGCAGTCTTT AAGGCCGGGC ATTTTGCCTG GCGTCAGGCA ATCAGCCGAT TGTTCTTGTT AGCGATGCTT TTTGCTGGCT TGCCTGTGTG GGCCGATGAC CTCAGTAGTC TTGATGAGTT GGCCCAGGGG GATAATGCTA GCATCATGCA GCTTGGGGAT GCGCTGCAGG CCGACATCAC CCAAAGCGGC GAGGCGAATC GCGCCTTGTT TACGCAATTT GGGGTGGCCA ACAGCGCTGA GTTGCAGCAG CAGGGGATCG GCAATCAGGC GTATCTGCTG CAGCAAGGGG AGGCGATAGA GGCCAGCCTG CTGCAGGTTG GGGTCAACAA CAGTCTGATC GCCAGTCAAC TTGGAGCGAA CCTGTCTCTG GTAGCTGAGC AGCGGGGCAG TGATAACCAG GCCTATGTGC AACAGAGCGG TTATGACAAT GAGGTCAGCA TCTATCAAAA CGGTTCGGGT CATGGGGTGA TTGTGACTCA ATGGGGGAAT GCACAGCGAG CAAGCGTGAC TCAGGGTTAT CGTCAGCAGT AA
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Protein sequence | METNLMQAVF KAGHFAWRQA ISRLFLLAML FAGLPVWADD LSSLDELAQG DNASIMQLGD ALQADITQSG EANRALFTQF GVANSAELQQ QGIGNQAYLL QQGEAIEASL LQVGVNNSLI ASQLGANLSL VAEQRGSDNQ AYVQQSGYDN EVSIYQNGSG HGVIVTQWGN AQRASVTQGY RQQ
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