Gene Shew_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1724 
Symbol 
ID4922839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1978401 
End bp1978751 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content54% 
IMG OID640163286 
Productcytochrome c3 
Protein accessionYP_001093850 
Protein GI127512653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000750821 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAATA AAATTCTAAG TGCGTTATTT GGTGCTGGTT TGGCGGCGCT AGCCTTGTCT 
CCAGCGGCAA TGGCTGAGCC TCAAGAACTT GCAGAGATGC ATGCTGAGAT GGAAGGCTGT
GAAGCGTGTC ACGCCAATGG TGAACCATCT GCCGATGGTG CTCACGAATT TGAGCAGTGC
CAAAGCTGTC ACGGTACGCT AGCCGAGATG GACGCAGTGC ATAAGCCACA CGACGGTAAT
CTGATGTGCG CCGACTGTCA CGCACCGCAC GATTCAAACG TGGGCGATCG CCCAGCCTGT
GATAGCTGCC ACGACGATGG CCGCACCGCA GACTCTGTAT TGAAGAAATA A
 
Protein sequence
MSNKILSALF GAGLAALALS PAAMAEPQEL AEMHAEMEGC EACHANGEPS ADGAHEFEQC 
QSCHGTLAEM DAVHKPHDGN LMCADCHAPH DSNVGDRPAC DSCHDDGRTA DSVLKK