Gene Shew_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1717 
Symbol 
ID4922455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1970838 
End bp1971260 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content53% 
IMG OID640163279 
Productglobin 
Protein accessionYP_001093843 
Protein GI127512646 
COG category[C] Energy production and conversion 
COG ID[COG1017] Hemoglobin-like flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTCA CCGACGAGCA AAAACAGCTT ATTCAAAAGT CCTTTGCCGA GATCAATCGG 
CAAAACAGCA ACTTTGCTTC GCACTTCTAC GATTGCCTGT TCGCCATGGC ACCCTTGATC
CGTCCCATGT TCCAGAGCGA GCGGCCGGTA TTCGAGTATC ATTTCAACGA GCTCATCACC
ACGGCCGTTG CCAAGGTGCA TCAATTTAAC GAGGTCAAGC CTAAGCTAGA GGAGCTGGGA
CGAAAGCATC TGGATTACGG CGTCAATATT AGCCAATTTG AGGTGGTGCG CGCGGCCTTG
TTGCTGTCGA TTCAGGATTG CCTGCGAGAC GCATCCAGCC CGGCTATCGA GCAGGCCTGG
TCATGCTATT ACGATGAGAT TGCCAAGGTG ATGATTGCCG CCATGCAGGA GGCGGCATCC
TGA
 
Protein sequence
MPLTDEQKQL IQKSFAEINR QNSNFASHFY DCLFAMAPLI RPMFQSERPV FEYHFNELIT 
TAVAKVHQFN EVKPKLEELG RKHLDYGVNI SQFEVVRAAL LLSIQDCLRD ASSPAIEQAW
SCYYDEIAKV MIAAMQEAAS