Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1717 |
Symbol | |
ID | 4922455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1970838 |
End bp | 1971260 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640163279 |
Product | globin |
Protein accession | YP_001093843 |
Protein GI | 127512646 |
COG category | [C] Energy production and conversion |
COG ID | [COG1017] Hemoglobin-like flavoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCTCA CCGACGAGCA AAAACAGCTT ATTCAAAAGT CCTTTGCCGA GATCAATCGG CAAAACAGCA ACTTTGCTTC GCACTTCTAC GATTGCCTGT TCGCCATGGC ACCCTTGATC CGTCCCATGT TCCAGAGCGA GCGGCCGGTA TTCGAGTATC ATTTCAACGA GCTCATCACC ACGGCCGTTG CCAAGGTGCA TCAATTTAAC GAGGTCAAGC CTAAGCTAGA GGAGCTGGGA CGAAAGCATC TGGATTACGG CGTCAATATT AGCCAATTTG AGGTGGTGCG CGCGGCCTTG TTGCTGTCGA TTCAGGATTG CCTGCGAGAC GCATCCAGCC CGGCTATCGA GCAGGCCTGG TCATGCTATT ACGATGAGAT TGCCAAGGTG ATGATTGCCG CCATGCAGGA GGCGGCATCC TGA
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Protein sequence | MPLTDEQKQL IQKSFAEINR QNSNFASHFY DCLFAMAPLI RPMFQSERPV FEYHFNELIT TAVAKVHQFN EVKPKLEELG RKHLDYGVNI SQFEVVRAAL LLSIQDCLRD ASSPAIEQAW SCYYDEIAKV MIAAMQEAAS
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