| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1615 |
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| Symbol | |
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| ID | 4922905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1846913 |
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| End bp | 1847818 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163177 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001093741 |
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| Protein GI | 127512544 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.183501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00912591 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCTAA TCACCTGTAA GGCGCTGAGC AAGCAGTTCG GCAGCAAACG CGCACTCAAC
GACATCAACC TGGAACTCAG CGCTGGACAA CCTATCGCCC TGGTCGGCCC CAACGGTGCG
GGCAAGACCA CCCTGTTTTC GCTGCTGTGT GGCTATATTC GCCCAACAGA AGGAGCTGTG
GAGATCTTAG GACACGCCCC CGGCAGCACG GCGCTCCTGG GGAAGGTTGC CGCCCTGCCC
CAGGATGCGC GGCTCGATCC TAACCTCACC ATAGCAGCGC AGCTGGAGCT ATTTGCCCAG
TTACAAGGCT TTAATGCCGC ATCGGCGCGC CGGGAGTGCC AGCGGGTGTT GGCCTTGGTT
GATCTGGCAG AGGTCGCTGC GCAAAAGCCC TCCTCTCTTA GCCATGGCAT GAGCAAGCGG
GTGTCGATTG CTCAGGCACT CATAGGTTCT CCCGAGTTGG TACTGCTCGA TGAGCCGACC
GCGGGGCTGG ATCCCGCCAA CGCCAAGGCG ATACGCGAGT TGGTACGCGC TCAGATAGGC
AAGACCACCT TCGTCATCAG TTCACACAAC CTGGCGGAGC TGGAAAAGCT GTGTGACAAG
GTGCTCTATC TGGATAAAGG CGTGCTGAAT CAATCTATCT CGATTCAGGA CGAGCTGGCC
GACGAATACC TGACCCTCAC CATGCAGAGC TGCGACGACG AAGCGCTGAT GGCGGCGCTA
GAGGCGCTGC CTCAGGTCAT ATCGGTGAAA TCCAGTCAGA GCAAGGAGTT TGTGATCCAC
TATCAGGTCA CGGCAAGCTT CGCGTTGGAA ACCGAGCTGT TCGCCCTCTT CAATCGCCAA
GACTGGCGCT ACCGGGCCAT TCAACGAGGC CGCACCCTGG AAGACAAGCT GTTCTCACAG
GCTTAA
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| Protein sequence | MKLITCKALS KQFGSKRALN DINLELSAGQ PIALVGPNGA GKTTLFSLLC GYIRPTEGAV
EILGHAPGST ALLGKVAALP QDARLDPNLT IAAQLELFAQ LQGFNAASAR RECQRVLALV
DLAEVAAQKP SSLSHGMSKR VSIAQALIGS PELVLLDEPT AGLDPANAKA IRELVRAQIG
KTTFVISSHN LAELEKLCDK VLYLDKGVLN QSISIQDELA DEYLTLTMQS CDDEALMAAL
EALPQVISVK SSQSKEFVIH YQVTASFALE TELFALFNRQ DWRYRAIQRG RTLEDKLFSQ
A
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