| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1591 |
|---|
| Symbol | |
|---|
| ID | 4923688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 1820734 |
|---|
| End bp | 1821651 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640163153 |
|---|
| Product | bifunctional methionine sulfoxide reductase B/A protein |
|---|
| Protein accession | YP_001093717 |
|---|
| Protein GI | 127512520 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0791052 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAAC TAACGGAATT TGAGCGGTAT GTGATTGAGA GCAAGGGGAC CGAGCGCCCC
TTTAGTGGCG AGTATAACCA GCATGATGCG CCTGGTGTCT ATCACTGTAA GCGCTGTGAT
GCGCCTCTCT ATCTGTCCGA GCATAAGTTT AACGCCCATT GTGGCTGGCC TGCGTTCGAT
GATGAGATCC CGGGGGCGAT CAAACGCTTG CCTGATGCCG ATGGGCATAG GGTGGAGATA
GTGTGCGCTC AGTGCGGCGC GCATTTAGGC CATGTGTTTG AGGGAGAATA CCTGACAGAC
AAAAATTTAC GCCACTGCGT AAACTCTGTC TCCATGGTAT TCAAAGGTGA AGCGACGCAG
CAGAGCGATG ACAGTCATAT TCGCTGGGCG ACCATTGGCG GTGGCTGTTT CTGGTGTCTC
GAGGCGGTAT TTAGTCAGCT CAGAGGCGTG ATAGCGGTGA AGTCTGGCTA TGCGGGGGGG
GATGCTTCCA GCGCTAACTA CCGCGCCGTC TGCGCCGGGG ATACGGGCCA TGCCGAGGTG
GTACAGATAG AGTTCGACAG TCATATCATC AGCTTTGAAG AGCTGCTGGA GGTCTTCTGG
CAGAGCCATG ATCCCACTAC GCTTAATCGG CAGGGTAATG ATGTCGGTAC TCAGTATCGC
TCGGTGATCT TTGCCCATGA CGATGAGCAG ATTAGGGCCG CAAGTCAGAT GATATCCAGG
CTGACCGAGG CGAACATCTT CGATAAGCCC ATAGTTACAG AGCTGGTGGC GCTGGATAAC
TTCTATCCCG CCGAGCCTTA TCACGATGCC TACTTCGAGC ATAACCGGCA GCAGCCCTAC
TGTCAGATGG TGGTCAAGCC CAAGGTGGAT AAGATAAAAG CCCTGTTTAA GGAGCGGCTC
AAGTCGGGCG GCGGATAA
|
|---|
| Protein sequence | MRELTEFERY VIESKGTERP FSGEYNQHDA PGVYHCKRCD APLYLSEHKF NAHCGWPAFD
DEIPGAIKRL PDADGHRVEI VCAQCGAHLG HVFEGEYLTD KNLRHCVNSV SMVFKGEATQ
QSDDSHIRWA TIGGGCFWCL EAVFSQLRGV IAVKSGYAGG DASSANYRAV CAGDTGHAEV
VQIEFDSHII SFEELLEVFW QSHDPTTLNR QGNDVGTQYR SVIFAHDDEQ IRAASQMISR
LTEANIFDKP IVTELVALDN FYPAEPYHDA YFEHNRQQPY CQMVVKPKVD KIKALFKERL
KSGGG
|
|---|
| |