| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1580 |
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| Symbol | |
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| ID | 4922374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1809898 |
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| End bp | 1810812 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163142 |
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| Product | DNA polymerase III, delta prime subunit |
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| Protein accession | YP_001093706 |
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| Protein GI | 127512509 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.989268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.574364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCTAC CTTGGTTAAC CCCGGTTTGT GAGGCTTTCT GTAGCCAGCT GATATCTGGC
CAGCAGGGCC ACGCCTATCT GTTGGGGATC CACCAAGGCT ATGGCGGCAT GCAACTAGCC
AATACCTTGG CTCAGGCCAG CCTGTGTATG GCGCCGAGGG CCATTGGCGC CTGCGGTGTG
TGTAAGAGCT GTCAGTTGTT TATCGCCGGT AACCATCCTG ATTGCTATCA GCTGGAGGCC
GACGGCAATC AGATCAAGGT AGATCAAGTC AGGGAGCTGT GTCAGAAGTT GACCGCCACT
GCCCAGCAAG GGGGCAGACG GGTCGCTGTG ATTAAAAACT GTGAGCGACT CAACACCGCG
GCGGCCAACG CCCTGTTGAA GACTTTGGAA GAGCCGGGCA GAGAGACCCT CTTGTTGCTC
CAGAGTGATA CCCCCAGTCG TTTGATGGCT ACCATAAGCA GTCGTTGTCA GCGCCTGCAT
TGCCAGCTGC CGAGCCGTGA GGCGGTGCAG GAGTGGCTGG CGGCGCAGTT TAGCCTAACG
AGTGATGTGA CCTGGTGTCT GCCGGTTGTC GGCGGCCCTG TCGATCTGCT CACCGCCTTA
AATGATGGTC GCTACGAAGC CTTGATCGGC CTCAGAAAAG CCTGGGTGCA AAGTTTGTCG
TCTGGGCACC TGTGTGCTAA CTTAACTAAT ATAGATGAAA AGCAAGTTTC TGATGCACTT
AAGGTTTTGT ATGTTGTCCT GCGACAAAAA CTGGTGAAGC AGAAAAATGC TGATGCATTA
ATTAACATCA AGATAACAAA ATTTGCAGCC AAGGTTATGG AGACGTATCA TAGCCTGAGT
ATGATGCCTA ATGTGAATTT TATGGCCGTT TTTCAGGCGT TTATCTTAGA GTATCAGTCG
CTAACAACAA GTTAA
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| Protein sequence | MDLPWLTPVC EAFCSQLISG QQGHAYLLGI HQGYGGMQLA NTLAQASLCM APRAIGACGV
CKSCQLFIAG NHPDCYQLEA DGNQIKVDQV RELCQKLTAT AQQGGRRVAV IKNCERLNTA
AANALLKTLE EPGRETLLLL QSDTPSRLMA TISSRCQRLH CQLPSREAVQ EWLAAQFSLT
SDVTWCLPVV GGPVDLLTAL NDGRYEALIG LRKAWVQSLS SGHLCANLTN IDEKQVSDAL
KVLYVVLRQK LVKQKNADAL INIKITKFAA KVMETYHSLS MMPNVNFMAV FQAFILEYQS
LTTS
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