| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1578 |
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| Symbol | |
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| ID | 4922445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1808244 |
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| End bp | 1809251 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163140 |
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| Product | aminodeoxychorismate lyase |
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| Protein accession | YP_001093704 |
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| Protein GI | 127512507 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.853067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TGATCAAATG CGTGCTCATC GCACTCTTTA GCTTATTAAC CTTGAGCGCG
ATTGGCCTGT ATTGGGTCTA TCAGAGCGTG GTGAGTTATG GCCAGATGCC GCTTAAGCTA
GAAGCCCCCG TCGAGTTTGA GGTGGCGCGT GGTACCTCCT TTTCACAGAT GGCGAACACC
TTGGCACAAA CAGGTGCCGT GGACGAGCTT TGGAAGCTTA AGCTGCTGGT TAAGCTGCGC
CCCGAGCTTG CCAAGATCCG CAGCGGTCTG TATCAAATTT CTCCCAATGA CACTGTGGTC
GAGCTGCTCG AAAAGTTGCG TCAGGGAAAG GAGATGGTCT TCACCGTGAC CCTGGTCGAA
GGGCAGAGCA TCAAAGAGTG GCGCGAGCAG CTCAAGCAAT TACCGCGCCT GAAGTGGAAG
GAGGGCGCCT TCCTGGAGGT GCTTGAGGAC AATGGCGATA AGTCTAAGCT GCCCGAGGGG
AAGTTCTATC CCGACACCTA CCATTATGGC AATGGCGACT CGGTTAAGGT GATTCTGCAG
CAGAGCTATC AGAAGATGCA GCAGGAGCTA GACAGGGCCT GGCAGGAGCG CGACCAGAGC
ATACCGCTAA AGAGTCCCTA TGAGCTGCTG ACCATGGCAT CGATTATCGA AAAAGAGACG
GGTAAGGCCA GCGAGCGTCC CTGGATCTCG GCGGTCTTTA CCAATAGATT GCGTAAGGGG
ATGCGTCTAC AGACAGATCC TACTGTGATC TACGGCATGG GGGAGCGTTA CCAGGGCAAT
ATTACCCGCA AAGACTTGCG CGAGCAGACG CCCTACAACA CCTATCGTAT TCATGGCCTG
ACGCCGACGC CCATAGCCGC GCCGAGCGGG GCATCCCTGA TGGCGGCGGC GCGTCCGGCC
GATGTCGACT ACCTCTACTT CGTGTCGAAG AATGACGGCA GCCATATATT TTCTAAAACA
TTAACCGAGC ACAACCGTGC TGTAGACAAG TATCAGAGAA ATCGATGA
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| Protein sequence | MKKLIKCVLI ALFSLLTLSA IGLYWVYQSV VSYGQMPLKL EAPVEFEVAR GTSFSQMANT
LAQTGAVDEL WKLKLLVKLR PELAKIRSGL YQISPNDTVV ELLEKLRQGK EMVFTVTLVE
GQSIKEWREQ LKQLPRLKWK EGAFLEVLED NGDKSKLPEG KFYPDTYHYG NGDSVKVILQ
QSYQKMQQEL DRAWQERDQS IPLKSPYELL TMASIIEKET GKASERPWIS AVFTNRLRKG
MRLQTDPTVI YGMGERYQGN ITRKDLREQT PYNTYRIHGL TPTPIAAPSG ASLMAAARPA
DVDYLYFVSK NDGSHIFSKT LTEHNRAVDK YQRNR
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