| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1552 |
|---|
| Symbol | |
|---|
| ID | 4922496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 1783596 |
|---|
| End bp | 1784012 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640163114 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001093678 |
|---|
| Protein GI | 127512481 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAACATT ATGAAAGCTT GGGATACCTA GTGTCTCATC TTAATATCGA GCTTCAGAAG
GCCTTGGATG AGAGGCTAAA GCGCTATGAG CTAGACATTA AGCTCTGGCC CGTCCTGTTT
GCCCTGTGGC AGGAGGAGGG CGTTACTCAG ACAGAGCTGT CTAAGCGCTG TGACGTGGCT
AATTACACCA TGACTCGCCT GTTAGATCAG CTGCAGGTAC AGGGCTATAT TACCCGTCAT
CAGGAGGCGG ACAATCGTCG CGCCTTCAAA ATTTTCCTAA CCGACAGTGC CAAGGCGTTG
GAGCAAGACC TTATCTGCGA GGCCGAGCGG GTCAACGAGC AGTTTCTCGG TAATTTGTCT
GAGTTTGAAT CACAACAATT TATCTATCTA CTCAATAAGA TCAATGGCCT ATCCTAG
|
|---|
| Protein sequence | MKHYESLGYL VSHLNIELQK ALDERLKRYE LDIKLWPVLF ALWQEEGVTQ TELSKRCDVA
NYTMTRLLDQ LQVQGYITRH QEADNRRAFK IFLTDSAKAL EQDLICEAER VNEQFLGNLS
EFESQQFIYL LNKINGLS
|
|---|
| |