| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1532 |
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| Symbol | |
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| ID | 4921701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1756230 |
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| End bp | 1757969 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163094 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_001093658 |
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| Protein GI | 127512461 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.413566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAACTCA GAGATTACCA ACGCCAAGCC GTCGATGCTG CCATCAACCA CTTTAAGCGC
AGTGATGACT CCGCCCTGCT CGTCCTCCCG ACCGGAGCCG GCAAGAGTAT CGTCATCGCA
GAGCTTGCCC GCATCGCCAA GGGGCGCACC CTGGTGCTTA CTCACGTCAA GGAACTGGTG
GCGCAAAACG CCGAGAAGGT TGGACTACTG ACCGATGAGG CCAGTATCTT TTCCGCCGGG
CTGAAACAGA AATCGACCCG CAACAAGACG GTGGTGGCCA GCATTCAATC GGCGGTACGA
AATCCCAAGC AGTTTGACGA GCCCTATTCG CTGGTGATCA TCGATGAGTG TCACCGAGTC
TCCAACGAGA AAGAGAGCCA GTATCAGCAG CTGCTTAGTC ATCTAAGAAC AAAGAATTCG
AAACTCAGGC TCTTGGGCCT GACGGCCACC CCCTATCGCT TGGGCAGCGG CTGGATCTAC
CGCTATCACT ACCATGGCAA GATTGGCAAT ACCGAGCAGC CGGTGTTCGA GCACTGTATC
TTCGAGCTGC CGATGCGCCC GCTCATTAAA CAGGGCTTTC TGACACCGCC CAAGGTACTT
GATGGCCTGT CGGCCCAGTA TGATTTCAGC GAGCTCTCAC CCAATGCCAA CGGTGAATAC
AATGAGGCCG AAGTCGACTC TCTGCTGCAT CACGCGGGCC GCGCCACCAA GGCGATTGTG
GAGCAGATAA AACAGCTCAC CAACACCCGC GCCGGTACCA TCATCTTCGC GGCGACCGTG
CGTCATGCCA AAGAGATCAT GACCCTGCTG GACAGCCCCG AGGCGGGGCT AATCACCGCA
GATACACCAA GCCAGGAGCG CGATGCCATT ATCGATGCCT TCAAACGCCG CGAGCTCAGC
TACCTGGTCA ATGTTGCGGT ACTCACCACG GGCTTCGACG CCCCCCATGT GGATCTTATC
GCCATCTTGA GGCCCACGGC TTCTGTGAGC CTGTTCCAGC AAATGGTCGG CCGGGGCTTG
AGGATCTGCG AAGGCAAGCG GGATTGCTTA GTGATCGACT ACGCCGCCAA CGGCTTCGAC
CTCTTCTTTC CCGAAGTCGG TCGCCCCAAA CCCGACAGCA AGAGCGTGCC AGTACAGGTC
CCCTGCCCCG AGTGTGGCTT TGCCAACGTC TTCTGGGGGT TAGTCGATGG TGATGGCGAT
ATTATCGAGC ACTTCGGACG ACGCTGTCAG GCCGTGGTCG ATGACGGCGA CGGCAAGCAC
CAATGCGACT TTCGATTTCG CGCCAAGGCC TGCCCAAATT GCGGCGAAGA AAACGATATT
GCCGCCAAGG TGTGCCAGCA TTGTCAGTCA ACGCTTATAG ACCCGGACAA GCGTCTTAAA
GAGGTGCTAC AACAGAAACA TCATCACCTG TTCCGTTGCC AGGAGATGCT GTTTGAGGCC
GACAACGACA GGCTCAGGGT GCGTTACCTG GATATCGAGG GTAACGATTT CTGCTGTTAC
TTCAATTTTG CCACCAAGGC GCAGATCCGC GCCTTCTATG GCGTCTTTGT GCATCAACAC
ACACGCACAC CAGGCCAGAA ACAACCCACC TTTAGCAAGG TCGACCAGGT GATCGCCGCG
CGGGACTATT TTCGTATGCC GGATCTGCTG CTCCTCAAGA AGGGCAAACG CGGCTGGGAA
CTTGTCGAGA GTTTCTTCGA CTATCGGGGC CGATTCGATA GCCAGCATAA GTTTGTATGA
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| Protein sequence | MQLRDYQRQA VDAAINHFKR SDDSALLVLP TGAGKSIVIA ELARIAKGRT LVLTHVKELV
AQNAEKVGLL TDEASIFSAG LKQKSTRNKT VVASIQSAVR NPKQFDEPYS LVIIDECHRV
SNEKESQYQQ LLSHLRTKNS KLRLLGLTAT PYRLGSGWIY RYHYHGKIGN TEQPVFEHCI
FELPMRPLIK QGFLTPPKVL DGLSAQYDFS ELSPNANGEY NEAEVDSLLH HAGRATKAIV
EQIKQLTNTR AGTIIFAATV RHAKEIMTLL DSPEAGLITA DTPSQERDAI IDAFKRRELS
YLVNVAVLTT GFDAPHVDLI AILRPTASVS LFQQMVGRGL RICEGKRDCL VIDYAANGFD
LFFPEVGRPK PDSKSVPVQV PCPECGFANV FWGLVDGDGD IIEHFGRRCQ AVVDDGDGKH
QCDFRFRAKA CPNCGEENDI AAKVCQHCQS TLIDPDKRLK EVLQQKHHHL FRCQEMLFEA
DNDRLRVRYL DIEGNDFCCY FNFATKAQIR AFYGVFVHQH TRTPGQKQPT FSKVDQVIAA
RDYFRMPDLL LLKKGKRGWE LVESFFDYRG RFDSQHKFV
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