| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1526 |
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| Symbol | |
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| ID | 4923143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1749136 |
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| End bp | 1750071 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163081 |
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| Product | TolA family protein |
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| Protein accession | YP_001093652 |
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| Protein GI | 127512455 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | [TIGR02794] TolA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0124316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.623667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGGGA AATCAGAATT TACCGTTCCA CTCATCATTT CAGCCAGCAT TCATGTTGGC
GTGATAGTTG TTTTGGCCAT GGGCGTCGAT TTTAGTGAGA AGCCCAAGGT GGTGCCTCAG
GCCAGTGCGC CGGCGGTGCA GGCCGTGGTG GTGGATCAGA AACGGGTCAA CGAACAGGTT
GAGAAGCTAA AAGCCGAGAA GCTAGCCGCC GAGCGCAAGG AGAAGGCGCG TCAGGAGGAG
CTGGACCGTA AGGCCAAAGA GGCTCGCCAG GCCCGCGAGC GTGAGCAGGA GCGTATCAAG
AAGCTTGAGC AGGAGCGCAA GCAGAAAGAG CTAGAGACGC AAAATGCGGC CAAGGCTGCA
AAGGCTGCCA AGCTCAAAGA GCAGCAGGAG AAGGAGAAGG CCGCCAAGGC CGAGGCCCAG
CGTAAACAGA AAGAGGCCGA GCGCAAGGCC GCCGAAGAGG CCGCAGCCAA AGCCGAAGCC
AAGCGTAAGG CTGAAGAGGC TGCTGCCAAG AAGGCCGCCG AAGAGCGTAA GCGTAAGGAA
GAAGCCGAGG CGAAACGTAA GGCGGAAGAG GCCGCGCGCC GCGAGCAGGA ACGTATGATG
CAAGAGGCCT TAGCCGCCGA GCAGGCCGCG CTGTCCCAGA CTCGCAACAA GCAGGTGATG
AGTGAGGTGC AGCGTTATAC CTCGATGATC CGCGCCACGA TTCAGCGCCA CCTGGTGGTA
GATGAGTCGA TGCGAGGCAA GAGCTGCCGC GTGTTTATTC GTCTGGCTAA AGATGGCTTT
GTGACCGGCA ACGAGATAGT GTCTGGCGAT CCTGTGGTGT GCCGGGCGAC TAAGGCGGCG
ATCAACAAGG CGGGACGTCT GCCTGTTTCG CCCGAGGCCG ATGTTTACAA CAAGCTAAAA
GAGATTAATC TCACCGTACA ACCGGAGTTT AATTAA
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| Protein sequence | MAGKSEFTVP LIISASIHVG VIVVLAMGVD FSEKPKVVPQ ASAPAVQAVV VDQKRVNEQV
EKLKAEKLAA ERKEKARQEE LDRKAKEARQ AREREQERIK KLEQERKQKE LETQNAAKAA
KAAKLKEQQE KEKAAKAEAQ RKQKEAERKA AEEAAAKAEA KRKAEEAAAK KAAEERKRKE
EAEAKRKAEE AARREQERMM QEALAAEQAA LSQTRNKQVM SEVQRYTSMI RATIQRHLVV
DESMRGKSCR VFIRLAKDGF VTGNEIVSGD PVVCRATKAA INKAGRLPVS PEADVYNKLK
EINLTVQPEF N
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