Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1506 |
Symbol | |
ID | 4924221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1728569 |
End bp | 1728919 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640163061 |
Product | glyoxalase/bleomycin resistance protein/dioxygenase |
Protein accession | YP_001093632 |
Protein GI | 127512435 |
COG category | [R] General function prediction only |
COG ID | [COG3324] Predicted enzyme related to lactoylglutathione lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00430807 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.832914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAG ACCAGACCAT TAACTATATC GAGATCCCGG TTAAGGATAT TGCCGCGACC AAGGCCTTCT TTGGCAAGGT GTTCGGCTGG CAGTTTGAAG ATTATGGTCC CGAGTACAGC TGCTTTACCA ATGCCGGTAT TGCCGGTGGA TTTTTTCTGT CGGATAAAGG ATTCGATATC GCCTCTGGTT CGCCGTTAAT CGTACTCTAT GCCAAGGCGC TAGAGGTATG TTTAACCTCG GTTGCCGATG CGGGCGCCTT GATCACCCAG GAGATCTTCT CATTTCCTGG CGGTCGTCGT TTTCATTTTA AGGACCCAAA CGGTAACGAG TTTGCGGTAT GGTCTGAGTA A
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Protein sequence | MNQDQTINYI EIPVKDIAAT KAFFGKVFGW QFEDYGPEYS CFTNAGIAGG FFLSDKGFDI ASGSPLIVLY AKALEVCLTS VADAGALITQ EIFSFPGGRR FHFKDPNGNE FAVWSE
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