Gene Shew_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1506 
Symbol 
ID4924221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1728569 
End bp1728919 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content49% 
IMG OID640163061 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001093632 
Protein GI127512435 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00430807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.832914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAG ACCAGACCAT TAACTATATC GAGATCCCGG TTAAGGATAT TGCCGCGACC 
AAGGCCTTCT TTGGCAAGGT GTTCGGCTGG CAGTTTGAAG ATTATGGTCC CGAGTACAGC
TGCTTTACCA ATGCCGGTAT TGCCGGTGGA TTTTTTCTGT CGGATAAAGG ATTCGATATC
GCCTCTGGTT CGCCGTTAAT CGTACTCTAT GCCAAGGCGC TAGAGGTATG TTTAACCTCG
GTTGCCGATG CGGGCGCCTT GATCACCCAG GAGATCTTCT CATTTCCTGG CGGTCGTCGT
TTTCATTTTA AGGACCCAAA CGGTAACGAG TTTGCGGTAT GGTCTGAGTA A
 
Protein sequence
MNQDQTINYI EIPVKDIAAT KAFFGKVFGW QFEDYGPEYS CFTNAGIAGG FFLSDKGFDI 
ASGSPLIVLY AKALEVCLTS VADAGALITQ EIFSFPGGRR FHFKDPNGNE FAVWSE