Gene Shew_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1501 
Symbol 
ID4921958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1721906 
End bp1722262 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content52% 
IMG OID640163056 
Productglutaredoxin 
Protein accessionYP_001093627 
Protein GI127512430 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.676522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATTG TTCGCTGGGT ATTAGGCCGC ATTATCCTGT TTCTGAATTT TGTTTTTACC 
CCTAAGAAGC GTCAGCGTCC GCTGGCCGAG CAGGCAAAGG TCGACGAGCA GACACAAGGG
CTCCAGCTTT ATCAATACGC CGCCTGCCCC TTCTGCGTTA AGGTACGCCG CGCCATTCGT
CGCCAAGGGC TAAATATCGT CACTGTCGAC GCCAAACAAG CCGAGCATCA ACAGATGCTG
GTAGAACAGG GTGGACTGGC CAAGGTGCCT TGCCTGCGTA TTGACGAGGC GGGAGAGACT
CAGTGGATGT ATGAATCCTC AGATATCATA GATTATCTCA ACAAGCGTTT CGCCTAA
 
Protein sequence
MFIVRWVLGR IILFLNFVFT PKKRQRPLAE QAKVDEQTQG LQLYQYAACP FCVKVRRAIR 
RQGLNIVTVD AKQAEHQQML VEQGGLAKVP CLRIDEAGET QWMYESSDII DYLNKRFA