Gene Shew_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1486 
Symbol 
ID4924343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1710668 
End bp1711156 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content53% 
IMG OID640163041 
Producthypothetical protein 
Protein accessionYP_001093612 
Protein GI127512415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAG TTCTATTGCT ATTACTCTTA AGCCTGAGTG CTCAGGCCGC GGATCTCGAC 
AGGCTACATA AGATAGGTAG CGCCGAGATG CAGTATCTGT TTTGGACCTT GTATCGAGCA
GAGCTGTATA GCGCTCAGCC TGACTATGAG GCGAGTGCTG ATAAGGCGCT GAAGATAAAT
TACTACCGAG ATATCGAAAG CGATCTGCTT ATTGAGGCCA CGGTAGAGCA GTGGCGTCAC
CTGGGTTACT CAGACCAGCA GATAACTTCT TGGCAGCGGC ATATCCAGGG ACTCTGGCCC
GATGTGCGCG AGGGCGATAG CCTGACCCTA TGGGTGAACA GCCAAGGCGA CAGCTATTTC
TACTTCGGTG ACAAGCCGCT TGGGCAGATC CAGGATCGCA CCTTCGGCGA GGCGTTTCTG
GCCATCTGGT TATCTGAGCG CACCTCAGAG CCTGAGTTAA GACAGGGCCT ATTGGGATTA
AGACAATGA
 
Protein sequence
MGKVLLLLLL SLSAQAADLD RLHKIGSAEM QYLFWTLYRA ELYSAQPDYE ASADKALKIN 
YYRDIESDLL IEATVEQWRH LGYSDQQITS WQRHIQGLWP DVREGDSLTL WVNSQGDSYF
YFGDKPLGQI QDRTFGEAFL AIWLSERTSE PELRQGLLGL RQ