Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1486 |
Symbol | |
ID | 4924343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1710668 |
End bp | 1711156 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640163041 |
Product | hypothetical protein |
Protein accession | YP_001093612 |
Protein GI | 127512415 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAAG TTCTATTGCT ATTACTCTTA AGCCTGAGTG CTCAGGCCGC GGATCTCGAC AGGCTACATA AGATAGGTAG CGCCGAGATG CAGTATCTGT TTTGGACCTT GTATCGAGCA GAGCTGTATA GCGCTCAGCC TGACTATGAG GCGAGTGCTG ATAAGGCGCT GAAGATAAAT TACTACCGAG ATATCGAAAG CGATCTGCTT ATTGAGGCCA CGGTAGAGCA GTGGCGTCAC CTGGGTTACT CAGACCAGCA GATAACTTCT TGGCAGCGGC ATATCCAGGG ACTCTGGCCC GATGTGCGCG AGGGCGATAG CCTGACCCTA TGGGTGAACA GCCAAGGCGA CAGCTATTTC TACTTCGGTG ACAAGCCGCT TGGGCAGATC CAGGATCGCA CCTTCGGCGA GGCGTTTCTG GCCATCTGGT TATCTGAGCG CACCTCAGAG CCTGAGTTAA GACAGGGCCT ATTGGGATTA AGACAATGA
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Protein sequence | MGKVLLLLLL SLSAQAADLD RLHKIGSAEM QYLFWTLYRA ELYSAQPDYE ASADKALKIN YYRDIESDLL IEATVEQWRH LGYSDQQITS WQRHIQGLWP DVREGDSLTL WVNSQGDSYF YFGDKPLGQI QDRTFGEAFL AIWLSERTSE PELRQGLLGL RQ
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