| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1475 |
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| Symbol | |
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| ID | 4922895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1700959 |
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| End bp | 1701648 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163030 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093601 |
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| Protein GI | 127512404 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0699473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.900175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA CCCATGAAAT CAGCCCTGCT ACCGGGGCGC AGCAAGCGGG TCACTCAGAG
TCGCGGCAAC AGCAGCCCAC CAGTCTAGCG GAGCAGACTC TGGCGGTCTT TCCCCTGCCA
CTGTTTGTGC TGCCGGGGGG CGTGCAGCGC CTGAGGATCT TCGAGCAGCG CTATCTTGCC
ATGGTTTCAG AATCCTTGGT TTCAGAATCC TTGGTGGCCG AGTCTACAGG CAAAGGCTTC
GTGATCGCCC GCTACGATAA GGCGTTTGAC TTCAATGTCC CCGACTGGGG CACTAAGGTG
CAGATAATCG ATTTTCACCA CGGCGAAGAT GGCCTGCTGG TGATCGATGT TAGAGCTAAC
CATCTGGTGA GCCTGGACAG TTTCGATGTG CGTGGCGACG GGCTCTTGAT GGCTCGCTGT
CATTACCGCG ACCACTGGCC GACGCTTGCC GCCAGTACCA AGCGCGGCGA GCTGGGGCAG
GCCCTTAGCG CCCTGTTTGC CAAGCATCCA CAACTGGCCG AACTTTACCC GCAACCAGAA
TTTAATCGCC TGGATTGGGT CTGCGCTCGC TTTTTAGAGA TATTGCCTTT ATCTTTGAAT
GAGAAGGAGA AATTCATCTT GCCTGGCAGT TTTCCTCAGG CAAAATCGTT TCTCGATACA
TTCATTTTGG GTCAGGACAA AATTAATTGA
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| Protein sequence | MKITHEISPA TGAQQAGHSE SRQQQPTSLA EQTLAVFPLP LFVLPGGVQR LRIFEQRYLA
MVSESLVSES LVAESTGKGF VIARYDKAFD FNVPDWGTKV QIIDFHHGED GLLVIDVRAN
HLVSLDSFDV RGDGLLMARC HYRDHWPTLA ASTKRGELGQ ALSALFAKHP QLAELYPQPE
FNRLDWVCAR FLEILPLSLN EKEKFILPGS FPQAKSFLDT FILGQDKIN
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