| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1466 |
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| Symbol | |
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| ID | 4924076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1687890 |
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| End bp | 1689467 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163020 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093592 |
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| Protein GI | 127512395 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.385052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TGCTCATTCA CTCGACAAAA CATCTTTCCA TCGCCGTCAC CTATGCCTGT
CTCGGCATTG TCGCGGCCGC GCTCGCCTTT GGGGTCTGGT TTTTGAATGC CCGTCCCGAC
CTGTCCATCT GGCATTCGAC CATGCTCGAG CATCAGTTTC GCCTCGATAG CGAGGTAGAC
GATTTCCCTG CCTATCAGGC GCTGGAGGCC AAGCTGTTCG AGGAAGTAGA GAGTAAGATC
TACCGCCGCA CCCAACACTT GGATCAGCCC CTCAATCGCT ATTGGCATGG CAGCTTTGCC
GATCCAGACA ACTGGCCTAA GGCCTGGAAT CGCAGCTATG AGTGGGCCAA GCCAGACGCC
GAGTTTGGCA TCTTGTTGCT GCACGGCATG TCAGACTCAC CCTATGCCTT GTCGCACTTT
GCCGAGCATT TTAAGGGGCG TGCCCACCTG CTGGGGCTAA GATTGCCGGG CCACGGCACC
ATACCCTCTG GCTTGGTGGA GCTTAAATGG CAGGAGATGG CCAGGGCGGT GGAGCTGGCG
ACCAAGCATC TTAAGCAGCA GATGGGCGAT AAGCCGCTCT ATGTGGTGGC CTTCTCTACC
GGCGCGGCGC TGGCGTTAAA CCATGAGCTC GAGCGGCTCG CGCATAATTC GACGCTGAGT
TACCGCGGCA TGATCTTCCT CTCGCCGGCC ATAGGTCTGT CGCCGGTGGC GGCCGGTGCC
AAGTGGCAGG ACAGGTTAGG GCGGCTTTTG GGGCTAGAGA AGCTGAGCTG GAACTCGATT
CAGACCGAGT ACGATCCCTT TAAATACAAC TCCTTCGCCG TCAATGCCGG CGATGTGGTC
TATCAGCTGG CAGAGCGCAA TCAACAGCTG ATGCAGGCGA TGCCCCAGGA GCAATTGGCC
GAGCTGGCCG ACATCTTAAC CTTTCAGTCG GTGGCCGACG CTACTGTCTC GACCCCGGCA
GTGGTGAGCA ATCTCTATGG GCGTCTGCCT TCGAAACAGC ATCAGCTGGT GCTGTTTGAT
ATCAACCGCC AACCCCTGAG TCTGGCCCTA GTGGTGAGCG ATCCGCTGAC TGCCTTGTTG
CCTTCACTCA GTCTCGATGC CCCAAGATTC GATCTAACTC TGGTGCAGAA TCGTCAAGCT
GTTCCGGAGC GGAATCAGGA GAGAGAGCAG GAGTTGGTTG CGCAAACTGT GCTTTCTCAA
AGCGATCCGT CACAACATAA GCCGTCACAG AACGAGCCGC TAAAGAGCCT CGACGAGGTC
GAGGCCAACA GATATCGACC TGGGAAAGTG GTTGTTCATC AGCCCTTAGG GCTCAATTGG
CCGGCGGGCA TCTACTCGCT CTCCCATGTG GCCCTGCCTT ATCCCGCGAG CGATAACCTG
TATGGCACGG CGTTCGTCAA GGGGAGTCAC AGGGTGCAGA TTGGTGCGGC GGCTACCCGC
GGGGAGCGCG GCGTGCTGGG CGTGTCGGCA GCGGAGGTGC TCAGGCAGAA ATGGAATCCT
TTCTTCCCTT ATCTGTTAGA GCGGGTGGAT AGCTTTATCC AGGCGCGCCA AGGGACTAAT
TCTACGCCTG CAAACTAG
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| Protein sequence | MKTLLIHSTK HLSIAVTYAC LGIVAAALAF GVWFLNARPD LSIWHSTMLE HQFRLDSEVD
DFPAYQALEA KLFEEVESKI YRRTQHLDQP LNRYWHGSFA DPDNWPKAWN RSYEWAKPDA
EFGILLLHGM SDSPYALSHF AEHFKGRAHL LGLRLPGHGT IPSGLVELKW QEMARAVELA
TKHLKQQMGD KPLYVVAFST GAALALNHEL ERLAHNSTLS YRGMIFLSPA IGLSPVAAGA
KWQDRLGRLL GLEKLSWNSI QTEYDPFKYN SFAVNAGDVV YQLAERNQQL MQAMPQEQLA
ELADILTFQS VADATVSTPA VVSNLYGRLP SKQHQLVLFD INRQPLSLAL VVSDPLTALL
PSLSLDAPRF DLTLVQNRQA VPERNQEREQ ELVAQTVLSQ SDPSQHKPSQ NEPLKSLDEV
EANRYRPGKV VVHQPLGLNW PAGIYSLSHV ALPYPASDNL YGTAFVKGSH RVQIGAAATR
GERGVLGVSA AEVLRQKWNP FFPYLLERVD SFIQARQGTN STPAN
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