| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1462 |
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| Symbol | |
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| ID | 4920968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1684467 |
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| End bp | 1685117 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640163016 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001093588 |
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| Protein GI | 127512391 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTAC AGCTGCAACT GCTTTTCTCA TTGGCCGTCA TACACACGGT CGCCCTGGCA
AGCCCTGGCC CGGATTTCGC CCTGGTGGTC AGGCTGGCCG CCCAGGAGCA CAGACGCACG
GCGGTCGCCG CCGCGCTGGG CCTGGCGGTG GCCATCACGC TACACACATT GCTGAGCCTC
ACCGGGGTGA GCCTTATCAT CAAGGGCTCC CCTAACCTCT TCATGGCGGT GCAGCTGATT
GGCGCCAGCT ACCTTGGCTG GATGGGCATA GGCGCGATAC GCGCCGCCAT CGCCCACTGG
CGCGATGAGG CGCATCTGAA TGCGGCAAGT GCGGCGGGTC GAGGGCTCGG CGCGGCTCAG
GGCTTCATGC AGGGGGTCTC CACCAACCTG CTCAATCCCA AGGCGCTGGT ATTTTTCATC
ACCCTATTCT CGACCCTGAT CACCCCAGAG GTGACCCTGA GCACTAAGGT GGCCGCCACC
GCCATGATGT TCGCCCTCTC TTTGGGGTGG TTTAGCCTGA TAGCCCTGGT GCTCTCTCAT
CCCAAGATGC AGCTCAAAAT GAAAAGAGCA ACCCCAATGA TCAACCTGTT GACCGGATTG
CTCTTTATCT TCGTCGCCGG AGTGATCCTC ACCGGCGCCC TCGCCCGTTA A
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| Protein sequence | MELQLQLLFS LAVIHTVALA SPGPDFALVV RLAAQEHRRT AVAAALGLAV AITLHTLLSL
TGVSLIIKGS PNLFMAVQLI GASYLGWMGI GAIRAAIAHW RDEAHLNAAS AAGRGLGAAQ
GFMQGVSTNL LNPKALVFFI TLFSTLITPE VTLSTKVAAT AMMFALSLGW FSLIALVLSH
PKMQLKMKRA TPMINLLTGL LFIFVAGVIL TGALAR
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