| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1458 |
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| Symbol | |
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| ID | 4921862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1680465 |
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| End bp | 1681688 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163012 |
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| Product | serine/threonine transporter SstT |
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| Protein accession | YP_001093584 |
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| Protein GI | 127512387 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3633] Na+/serine symporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.811029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAA ATCGTTCCTT ATTTGCCAAG TTGGCAGATG GCAGCTTAGT GCTGCAAATT
ATCTTGGGGA TCATTGCCGG GGTAGCCCTG GCGAGTTTTT CACCTTCCTC GGCAGAGAGT
GTCGCCTTTC TAGGTGATCT GTTTGTCGGC GCGCTAAAGG CGATTGCGCC GATCTTAGTG
TTTATTCTGG TGGCGGCCTC GATAGCCAAT CAGAAGAAAA ATACCAAGAC CAACATGCGA
CCTATCATAG TCCTCTATCT GTTTGGTACC TTTGCCGCGG CGATCACCGC AGTGACCATG
AGCTTCCTCT TCCCCACCTC TTTGGTGCTG GTGAGCGGTG CCCAAGGTGC GACGCCGCCG
GAGGGGATTG GCGAAGTCCT CAATACCTTG CTCTTCAAGG TGGTCGATAA CCCGGTTAAT
GCCCTGATGA CGGGTAACTA TATTGGCATC CTGGCCTGGG GTGTTGGCCT AGGCATCGCC
CTGCATCACG CCTCTGAGAA CACTAAGACG GTATTTGCCG ATGTGAGCCA CGGTGTCTCT
CAGATGGTGC GTTTCGTGAT CCGTCTGGCG CCTATCGGCA TCTTCGGTTT GGTGGCTAAC
ACCTTCGCCG CAACCGGTTT CGAGGCGATT GCCGGCTATG CTCAGCTGCT TGCCGTGCTG
CTGGGTTCTA TGCTGATCAT CGCGCTTATC ATCAACCCGC TTATCGTCTG GTTTAAGATC
CGCCGTAACC CTTATCCGCT GGTATTTACC TGCCTCAGAG AGAGCGGCGT GACCGCCTTC
TTTACCCGCT CGAGCGCGGC CAACATCCCG GTGAACATGG CTCTGTGTGA GAAGCTGGAT
CTGCATGAAG ATACTTTCTC GGTATCTATC CCACTAGGGG CGACCATCAA CATGGCGGGC
GCGGCGATCA CTATTACCGT ATTGACTCTG GCGGCGGTGC ACACAGAAGG GATCCAGGTC
GATATCCTGA CCGCGATTCT GCTGAGTGTG GTAGCGGCGG TTTCGGCCTG TGGCGCCTCT
GGTGTGGCCG GTGGCTCGCT GCTGCTTATC CCGCTGGCCT GTAGCCTGTT TGGTATCTCT
AATGATGTCG CCATGCAGGT GGTTGCCGTG GGCTTCATCA TTGGCGTGAT TCAAGACTCG
GCGGAGACCG CCCTCAACAG CTCCACCGAC GTGCTCTTTA CCGCGGCGGC CTGTGAGGCG
GCCGAGCGTC AGGCGGAGAT TTAA
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| Protein sequence | MNQNRSLFAK LADGSLVLQI ILGIIAGVAL ASFSPSSAES VAFLGDLFVG ALKAIAPILV
FILVAASIAN QKKNTKTNMR PIIVLYLFGT FAAAITAVTM SFLFPTSLVL VSGAQGATPP
EGIGEVLNTL LFKVVDNPVN ALMTGNYIGI LAWGVGLGIA LHHASENTKT VFADVSHGVS
QMVRFVIRLA PIGIFGLVAN TFAATGFEAI AGYAQLLAVL LGSMLIIALI INPLIVWFKI
RRNPYPLVFT CLRESGVTAF FTRSSAANIP VNMALCEKLD LHEDTFSVSI PLGATINMAG
AAITITVLTL AAVHTEGIQV DILTAILLSV VAAVSACGAS GVAGGSLLLI PLACSLFGIS
NDVAMQVVAV GFIIGVIQDS AETALNSSTD VLFTAAACEA AERQAEI
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