| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1456 |
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| Symbol | |
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| ID | 4921204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1677608 |
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| End bp | 1679176 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163010 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001093582 |
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| Protein GI | 127512385 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCT CTGTGGTAAG CAAAAGCATG ATGCGATTGG CCTCAAAGTT GATGGCTTTG
CCCTCGAAGT TGATGACTCT GGCCTTGACC CTGAGCCTAG TGTCGGCCTG CAGCAGTTTA
CCGCCACCCC AGCAACTTAC CCCCAGCCAC AAGCTGGCTG CGCCGACCGA TTCTGGCCTG
TATCGTTACC TCGAAGGCGA CCTCAAGGCG CATCCAAACA AGACGGGCTT TCTGCCTCTC
TCATCCGGTG TCGATGCCTT CGTGGCCCGC CTGGCGATAG TCGATGCGGC CAGTCAGAGC
ATAGATCTGC AATACTACAT CTATCACGAC GATGAAACCG GCCGTCTGCT GATCTGGCAC
TTGATCGACG CCGCCGATCG TGGTGTGCGG GTGAGGGTGT TACTCGATGA CCTCACCACC
AAGACCCTGG ATGATGGGCT GGTGCTGCTG GCCAGTCACC CCAATATCGA GATACGCCTG
TTTAATCCCT CCTATGAGCG CACCTTTCGC AGCTTCGCCA TGTTGACCGG CTTCTCCCGC
CTCAATCACA GGATGCACAA TAAATCCCTT ACTGTGGACA ATCAGATAAC CATTGTCGGC
GGGCGCAACA TAGGCAATGA GTATTTCTCC AAGAATGACG ATGTGGATTT TGGCGACTTC
GACCTCCTGA CCATAGGCGA TGTGGTCGAT GAGGTATCGG ATCAATTCGA CCGCTACTGG
AACAGCGAGC AGGTCGAGAG CGTGGTCAAC CTGGTGCCGC CACCGACCAG TGAGATGTAC
AAAGAGGCGG CCAAGATCAT GGCCAGAAAC AAGCAGAACT TCCTCCACGA TGAGTACCTT
AATCGCCTCG AGCTGAGCGA GCTGCTGACA CAGATCACCT CCAAGGGGCT CGCCTGGTAT
TGGGGCGATG CGCAGCTACT GTACGATCCG CCCCAGAAGG CGAGCAGGCA GGGCCATCAG
GAGTGGTTGC TAACTGACCT TAGCCAATTC CTGGGCAAGG CGCGCAAGGA AGTACTCATC
GTCTCGCCTT ACTTTGTGCC TACCGACGGC GGCTGTCAGG CCTTGATAGA CGCGGCTAAG
CAGGGGATCA AGATCACCAT TATCACCAAT AGCCTGGCGG CCACCGATGT GTTGGCAGTG
CATGCAGGCT ACAAGGCTTA TCGCGAGCGG TTGCTGGAAA ACGGCATCGC CCTGTATGAG
GTTAAGGTAG ATATCAACAA CCGTCCCAGC GCCTGGAAGG GCAGTTCGCG CACCAGCTTG
CATGCCAAGA CCTTTGTGCT GGACAGGGCG TCTGTGTTTG TCGGCTCCTT TAATTTCGAC
CCCAGATCGG CCTGGATCAA CACTGAGATG GGGCTGATTG TCGACCAGAG TGAGTTTGCC
GGCGAATTAG TGGATGAGAT TCAAAAGTCC CTCAAGCGCA GCAGCTACCG CTTGGATCTT
AACGATGGCG AGCTGATCTG GCATGACGAT CTTAAGGGCC AAGTCTATTA TGCCGACCCG
GATGCCAGCT TCTGGCGTCG TTTCATGGCC GATTTTATCG GTCTGCTGCC GATAGAGTCA
CAGTTGTAA
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| Protein sequence | MNLSVVSKSM MRLASKLMAL PSKLMTLALT LSLVSACSSL PPPQQLTPSH KLAAPTDSGL
YRYLEGDLKA HPNKTGFLPL SSGVDAFVAR LAIVDAASQS IDLQYYIYHD DETGRLLIWH
LIDAADRGVR VRVLLDDLTT KTLDDGLVLL ASHPNIEIRL FNPSYERTFR SFAMLTGFSR
LNHRMHNKSL TVDNQITIVG GRNIGNEYFS KNDDVDFGDF DLLTIGDVVD EVSDQFDRYW
NSEQVESVVN LVPPPTSEMY KEAAKIMARN KQNFLHDEYL NRLELSELLT QITSKGLAWY
WGDAQLLYDP PQKASRQGHQ EWLLTDLSQF LGKARKEVLI VSPYFVPTDG GCQALIDAAK
QGIKITIITN SLAATDVLAV HAGYKAYRER LLENGIALYE VKVDINNRPS AWKGSSRTSL
HAKTFVLDRA SVFVGSFNFD PRSAWINTEM GLIVDQSEFA GELVDEIQKS LKRSSYRLDL
NDGELIWHDD LKGQVYYADP DASFWRRFMA DFIGLLPIES QL
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