| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1432 |
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| Symbol | |
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| ID | 4921272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1647099 |
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| End bp | 1647575 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162971 |
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| Product | ferredoxin-type protein NapF |
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| Protein accession | YP_001093558 |
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| Protein GI | 127512361 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain |
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| TIGRFAM ID | [TIGR00402] ferredoxin-type protein NapF |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00178513 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.390259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAATC GCATCAACCA AAGCCGCCGT AACCTCTTCA GTCGCCGCAA GAGCCAGGTG
ATCCGCCCGC CCTGGAGCAG CACAGATGTC GAATTTACCG ATATCTGCAC CCGCTGCGAT
AAGTGTATCG ACGCCTGTGA AACCAAGATC CTCTCCCGTG GCGACGGTGG CTTTCCCGAG
GTCAGCTTCA GTCAGGATGA ATGCACCTTC TGTGGCGCCT GTGCCAAGGT GTGTCCCGAG
CCGCTGTTTA CCGACACCGA AGAGACCCCC TGGCAGATCA AGGCCAGTAT CGACCAGAGC
TGTCTCGCCA ACAGCGGCAT CTGGTGTCAG ACCTGTAAAG ATGCCTGCGA TCCCAGAGCC
ATCAGCTTTA CCGCCAGCAT AGGTCAGGCG CCCAAGCCTG TGATCGATAC CGAGATGTGT
AACGGCTGCG GTGCCTGCGT AGCCCCCTGC CCTAATCAAT CAATAAAACT TAGCTAA
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| Protein sequence | MSNRINQSRR NLFSRRKSQV IRPPWSSTDV EFTDICTRCD KCIDACETKI LSRGDGGFPE
VSFSQDECTF CGACAKVCPE PLFTDTEETP WQIKASIDQS CLANSGIWCQ TCKDACDPRA
ISFTASIGQA PKPVIDTEMC NGCGACVAPC PNQSIKLS
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