| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1396 |
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| Symbol | |
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| ID | 4921274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1605197 |
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| End bp | 1606300 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640162937 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001093524 |
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| Protein GI | 127512327 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00425013 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.314583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTAG AAGATCTAGT GATACTGTTA GTGGAAGACG ACCCGGTATT TCGCAGTATT
GTGGCCGCCT TCTTGACCAA TCGCGGTGCG ACCGTGATCG AGGCCGATGA TGGTCAGCAG
GGATTAGAGC GGTTTAGTCA GCACGATTTC GATATTGTAC TGGCGGATCT CAGCATGCCT
ATCCTGGGTG GGCTGGATAT GCTCAAGCAG ATGATAAAGC GCAAGCCAGA TACCCTTTCA
ATCGTCATTT CCGGTAACCA GGTGATGGCC GATGTGGTCG AGGCGCTCAG AGTGGGCGCA
AGCGATTACT TAGTTAAGCC GGTTAACGAC CTCTGTCTTA TCGAGAATGC TATCCGTCAA
TGTGTGGGCG GCAGTAGTCA GCAAGATGTG CAGCTGGAAG ATCTCGACGA ATTATCCTAT
CAAGAGTTGG AAGAGCACCT TAATCTGCTT GAGCAGAACG CCGAGGCAGC TAAGAGCGTT
CAGCAGCAGC TGTTTCCTCC CTCTGTCATC GATTATCCCA AGGCCAAGAT CGACTATAGC
CTGTTCAAGC ATGACGAGGT CAGCGCTTAC TTTATCGATA GTGTCAATGT GGGCGAGCGT
TATCTCATCA TGTATATGGC GCATTTTCAT CCCCAAGATA ATCGCTGCGC CTTTGCGAGT
GTACTGCTGA AGAGCTTTGT CAATCAGAAG CTTAAACAGT TTCGCAATGA CAATACCGAA
ACTGTCATCG AGCCTTTCAA TATGTTGAGT TACCTCAATG AGCGGATGAG TAAGTCGGGG
TTAGATATCT ATGTGGATAT CGTCTATGCC GTGGTTGAGC TGACTCATTA TCGGGCGTCT
ATCGCCCAGG CGGGGAAGGG GCTGAGATGC TATATCCGCA ACGAAGAAGG CTTGATGCCG
CTAGCGATGC CAGACGCTTT GCAGCTGGGT ATTTTAGAGT GGGGCCAGCC CAGCACTCAG
TTTCGAAACT TAATGCCGGG AGAGAGCCTG TGTGTGGCTT CTAGCAATAT CGAGCATAGG
GATATGTTAC TCAATGATGA GTTTGTCGGT TTGAGCTATA GCCCTGAGGT TGCCCCTGGT
GGCTATGTGC AGATGAGCTT CTAG
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| Protein sequence | MALEDLVILL VEDDPVFRSI VAAFLTNRGA TVIEADDGQQ GLERFSQHDF DIVLADLSMP
ILGGLDMLKQ MIKRKPDTLS IVISGNQVMA DVVEALRVGA SDYLVKPVND LCLIENAIRQ
CVGGSSQQDV QLEDLDELSY QELEEHLNLL EQNAEAAKSV QQQLFPPSVI DYPKAKIDYS
LFKHDEVSAY FIDSVNVGER YLIMYMAHFH PQDNRCAFAS VLLKSFVNQK LKQFRNDNTE
TVIEPFNMLS YLNERMSKSG LDIYVDIVYA VVELTHYRAS IAQAGKGLRC YIRNEEGLMP
LAMPDALQLG ILEWGQPSTQ FRNLMPGESL CVASSNIEHR DMLLNDEFVG LSYSPEVAPG
GYVQMSF
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