| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1381 |
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| Symbol | flhF |
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| ID | 4920435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1590430 |
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| End bp | 1591854 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162922 |
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| Product | flagellar biosynthesis regulator FlhF |
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| Protein accession | YP_001093509 |
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| Protein GI | 127512312 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1419] Flagellar GTP-binding protein |
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| TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.286129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATAA AACGTTTTTT GGCAAAAGAT ATGCGCTCTG CATTGGCCCA GGTGAAAGAG
ACATTAGGTT CGGATGCGGT GATCATGTCG AACAAGAAAG TTACCGGCGG TATCGAGATC
GTCGCCGCGG TAGACTACGA TGAGCCTAAG CCGAGCGTGG CGAAAAATGA TGCCGCGCCT
TTGTCACCCA GCTTTCTCGA TCTGGCCGAG GAGAAGGTTT CTATCGGTCG TCAGCCCATT
AAGACAGAGT CAAAAAAACA GCCATCACCC GTAGCCGATT CGCTGCAAGC GCTGCTCGAG
CGTCAACAAA ATCGCGTCAG TCAGCAATTA AGCCAATCGA ATGAAGCACT CGAGATGCCT
GCCTGGGCCC AGGGATTGAA GGCGCCAAGC GATGAAATGG CCGCGCCTAA TATGCATGGC
GGCATGCAGG CTAATCCCCA TGCCAACACA CACGAGAGCC AGAATTTTAA CCGTGCCAAG
CGTGATAAGA GCGCGCCGGC CAGCGAGATC GAGTCTATGC GTGAAGAGCT GGCATCACTT
CGCAACCTAC TGACACATCA GGTGACCTCA CTGCTGACTG AGCAGAAGAG TCGTCTGGAT
CCTGTGGGCG CCATGTTAGA GAGCCGCCTG CTGGATGCCG AGTTTAGCCC TGAGGTCGCC
GCCAAGTTAT CGGCCTTGAG CGAGCACTAT GTGCCAGCGG ACTTGGTGAA GGCCTTGCCA
CGCAGCCTGG CGAACATGCT CGACAACCAG GGGGACGACA TCGTTCGTCA GGGCGGTGTG
GTCGCCTTCG TGGGCCCAAC TGGTGTGGGT AAGACGACGA GTGTCGCAAA ATTAGCCGCT
CGATTCGCCG CGCAGCATGG TTCAGATCAA GTTGCACTCA TTACAACGGA TCATTATCGC
ATTGGAGCCT ATGAGCAGCT GGCAACCTAT GGCAAAATAA TGGGGTGCCC GGTCAAGCAA
GCTCATGATC TCAATGAGTT GGAACAAATT CTTTATCAGT TCCGCAATCG CAAGCTAGTA
TTGATAGATA CGGCGGGCAT GGGACAGAGA GATGTGAGAT TGTTCCAGCA ACTTGATAAT
TTAACTGCAA ATAGCAGATT ACCTATTCGC AGTTATCTGG TACTGTCATC TACAAGTCAA
AGAAGAGTGC TTGAAGATGC CGTCGCGCAG TTTACCCGGA TTCCATTATC CGGCGCGATT
TTGACCAAAT TAGATGAATC AGTGGCCTTG GCACCGGCGT TGAGTGTGTT GATTCAAAGT
GGATTACCTT TGAGTTATGT CACCGATGGA CAAAGAGTGC CAGAAGATAT GCAAGTGGCC
GACACCTTAG CCTTAGCCAA CAAGGCCCTG TCGGTACTCG AAAAGAAAGT GCAACCAATA
CAGAATAACG AAAGGTCATA TGAACAGGCC TACGCATTTG AGTAA
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| Protein sequence | MKIKRFLAKD MRSALAQVKE TLGSDAVIMS NKKVTGGIEI VAAVDYDEPK PSVAKNDAAP
LSPSFLDLAE EKVSIGRQPI KTESKKQPSP VADSLQALLE RQQNRVSQQL SQSNEALEMP
AWAQGLKAPS DEMAAPNMHG GMQANPHANT HESQNFNRAK RDKSAPASEI ESMREELASL
RNLLTHQVTS LLTEQKSRLD PVGAMLESRL LDAEFSPEVA AKLSALSEHY VPADLVKALP
RSLANMLDNQ GDDIVRQGGV VAFVGPTGVG KTTSVAKLAA RFAAQHGSDQ VALITTDHYR
IGAYEQLATY GKIMGCPVKQ AHDLNELEQI LYQFRNRKLV LIDTAGMGQR DVRLFQQLDN
LTANSRLPIR SYLVLSSTSQ RRVLEDAVAQ FTRIPLSGAI LTKLDESVAL APALSVLIQS
GLPLSYVTDG QRVPEDMQVA DTLALANKAL SVLEKKVQPI QNNERSYEQA YAFE
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