| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1342 |
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| Symbol | flgA |
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| ID | 4920427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1551688 |
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| End bp | 1552395 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640162883 |
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| Product | flagellar basal body P-ring biosynthesis protein FlgA |
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| Protein accession | YP_001093470 |
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| Protein GI | 127512273 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
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| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.127049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTAA ATTTTGCATA TTTTCTGTTT TTGCTACTCA TCTCTCTGCC CTTAAAGGCG
GCTGAGACCA CCAGTGTTCC CTCTGTATCG ACCATAGCGC GATTAGCTAC AGAGGCTGTG
CAGGAAAAAA TGGCCTTCCC TCAAGATGCC AAGGTCATCA TTACCCCCCA AAGTCTGGAC
ACCCGGCTAA ATCCCCCCGC CTGTTTAGGC GAGCCAAAGG CGGAAATTGC CAGCGATCGC
GCCATCAGTA AAAACAACAC GGTCAAGATC AGCTGTGCCA GTCCAGATCT CGACTACCCC
TGGCAGATCT ACATTTCGGT TCGCGTCGAG GTGCTCTTCC CCGTGGTGGT GGCGAACCAG
ACCTTGGGGC CCGGCGATCT CATCGAATCG GATCAGATAC GCCTCGACTA TGTGGAGCAG
AGCCAGCTCA GAGGTCAGCA ATTTGATGAC CCGGTAGCAG TGACCGGCAC CCGGGTAAAG
CGCAGAATTC CCGCCAATCA GCCACTGTTT GCCAGCAACC TCTGCTTCGT CTGCAAGGGC
GATATCGTGG CCATCTATGC ACGGGCCGAT AATTTCGTGA TAAAAACCAA CGGTGAAGCG
TTAAAAGATG GTAACCTTGG CGATAAGATA CAGGTGCGCA ATAGTCGCTC CAACAAGACA
GTTGATGCAC ATGTAACGGG CATTGGCGAG GTGGAAGTCA GGATGTGA
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| Protein sequence | MKVNFAYFLF LLLISLPLKA AETTSVPSVS TIARLATEAV QEKMAFPQDA KVIITPQSLD
TRLNPPACLG EPKAEIASDR AISKNNTVKI SCASPDLDYP WQIYISVRVE VLFPVVVANQ
TLGPGDLIES DQIRLDYVEQ SQLRGQQFDD PVAVTGTRVK RRIPANQPLF ASNLCFVCKG
DIVAIYARAD NFVIKTNGEA LKDGNLGDKI QVRNSRSNKT VDAHVTGIGE VEVRM
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