| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1341 |
|---|
| Symbol | |
|---|
| ID | 4920452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 1551250 |
|---|
| End bp | 1551567 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640162882 |
|---|
| Product | anti-sigma-28 factor, FlgM |
|---|
| Protein accession | YP_001093469 |
|---|
| Protein GI | 127512272 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATAG ATATTAAGCA CGTAAATACA AACACTAACA GCCGGGTCGG CAGCGCCAGC
TCGAAAGCCT CGCAGCAAAA AGGTAGCACT GCGGCCACCA GCGCACCAGC GCAGACGGTG
AAAAGCGATT CTGTCTCTAT CACCTCTCAG GCGCAGCAGC TGCAAAGTGC CCAGGCCAAA
CTAAACGACA TTCCTGAAAT CGATATCAAG AAGGTCGAAC AGATTAAGGC GGCCATCGCC
GAGGGACGCT ATAAGATAGA TGCCGACAAA CTCGCCAGCA ACATAGCGCA GTTTGAAAAG
GAACTTCAGG ATCTTTAA
|
|---|
| Protein sequence | MPIDIKHVNT NTNSRVGSAS SKASQQKGST AATSAPAQTV KSDSVSITSQ AQQLQSAQAK
LNDIPEIDIK KVEQIKAAIA EGRYKIDADK LASNIAQFEK ELQDL
|
|---|
| |