| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1330 |
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| Symbol | |
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| ID | 4922572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1541211 |
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| End bp | 1542320 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640162870 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001093458 |
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| Protein GI | 127512261 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCAA AACAATCCTT ACATCCAGAA CACTACTATG ACGCGAAAAC ACTTGAGGTT
GAACAGACCC AGGTATTCGA AAAGAGTTGG GTATTTGTCG GTTTTAAAGA CCAGATCTCT
CAAAATCATG ATTTCATTAC ATTACAGGTA GGTAACACCC CTGTTGTGGT GCAGAACTTT
AATGGCGAGC TCAGTGCACT ACTCAACGTA TGCAGCCATC GCAAGGCAAA ACTTCAAACA
GCACAACGTG GTAACAGACC ACTGCTTTGC CCATACCATT GTTGGAGTTA CAAGAGCGAT
GGCGCCCTTA GTGGGGTACC ACAAAATCGT ACCGACTTTG GCTTGGATGA TTTAGCCAAA
AAAAAACTCG CCCTAAAACA GTTTAATCTG GCTAGTTGCG GTAACATGTT GTTTGTTCGC
GTTGCCAAAG AAGGTCCAAG ATTAGATGAA TTTTTAGGCC CTTATTTCAA TATATTAGAA
GAAATATCCA ATGATTTCGT CGATCCAGTG CAACAAGGCA ATTATCATTG GGAAACAAAT
TGGAAGCTAG CATGCGAGAC GGTTCTCGAA GTCTATCATG TAGCCGGAAC TCACCCCGAA
ACCTTTGCCA AATTTGCCAA ACCTGAAGTT GAGGTTGCTC ATTTTAATGG ACATACGACA
GGCAACACTC CATTGCAAGA CGCACCAAAG AAATGGTGGG CCGGCGCCAG GAAGCATCTC
AAACTCGAGC AAAGCACTTC CTATAGTGAA TACAATCATT TTTTCATCTA TCCCAATTTA
GCTATTGGAC TGACCAACGG TTCGCTCATG TCACTGCAAA CTTATGAGCC CAAAGGAACC
ACTCAGTCTC AGCTGAATTT TCAATTACGT ATGATGAGAA GAGTAGATGG AGGCGCTACC
AGCGATGCGG TTAAGGCGGC GATCAAGGCA AACTTTACTG AATTCAATCA TACCATCTTA
GAAGAAGATA GATTGGTAGC AGAATCATGT CAGGCTAATA TGCAGAGCAT TGACTCTGCT
GGGATACTGG GCAAATGCGA GGAGAGAATT CTGCATTTTC ATGACGCCTG GCGTCACGAT
GTCCAGCCCC ATTTACCATT GAGGGATTAA
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| Protein sequence | MIAKQSLHPE HYYDAKTLEV EQTQVFEKSW VFVGFKDQIS QNHDFITLQV GNTPVVVQNF
NGELSALLNV CSHRKAKLQT AQRGNRPLLC PYHCWSYKSD GALSGVPQNR TDFGLDDLAK
KKLALKQFNL ASCGNMLFVR VAKEGPRLDE FLGPYFNILE EISNDFVDPV QQGNYHWETN
WKLACETVLE VYHVAGTHPE TFAKFAKPEV EVAHFNGHTT GNTPLQDAPK KWWAGARKHL
KLEQSTSYSE YNHFFIYPNL AIGLTNGSLM SLQTYEPKGT TQSQLNFQLR MMRRVDGGAT
SDAVKAAIKA NFTEFNHTIL EEDRLVAESC QANMQSIDSA GILGKCEERI LHFHDAWRHD
VQPHLPLRD
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