| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1286 |
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| Symbol | |
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| ID | 4921639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1485948 |
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| End bp | 1487081 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162827 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093415 |
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| Protein GI | 127512218 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.881373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAACCC TTATTGTTAT TGTCTTTGTC GCTATCGGGA TCTCTTTTCT CTGTAGTGTA
TTCGAAGCCG TGCTTCTGTC TGTTACCCCT AGCTTTATCG CGAACCTGAA AGAAACCCAT
CCCGCGGCGG CCGAGCGTTT GAGCCACCAG AAGGAGAATG TGGAATCGCC ACTGGTCTCT
ATCTTGACCC TGAACACTAT CGCCCATACC GTCGGTGCCG CCGTTGCCGG TGCGCAGGCC
GCAAAGGTGT TTGGCGATGA GATGCTAGGC GTCTTCTCGG GCGTGCTGAC CTTCTTGATC
CTCTTCTTCT CTGAGATCAT CCCTAAGACA CTGGGCGCGA ACTACTGGCG CAGCCTGGCT
CCGAGTGTGT CGCTGGTGCT GCTGTGGATG GAGCGCATCA CTAAGCCGCT GATCTGGATG
TCACAGCAGG TGACTCGCAA GCTGGGTAAA GGCGACGATG GCCAATACAT TCGCCAGGAG
ATGAGCGCCA TGGCCAAGAT AGGCCATGAG TCGGGTGAGC TGGACGAGCA GGAATCTATG
ATCCTGACGC AGATGCTGTC GGTCAAGGAG ATGCCGGTTA CCGCCATCAT GACGCCAAGA
ACCGTGATGT TCAGCGTGCC AGCGACCATG ACTCAGACCG AGTTTGCCAA GCTTCATAAG
AAGAGCCCCT TTACCCGTAT TCCGGTTTTC GATGGCGATC GCGACAATAT CGTGGGTTAT
GTCAACCGCA ACACCATCCT GTTGTCGGAG CGGGACACGC CTCAGGCGCC TATCTCGGCG
GTGCGTCGTA ACTTGGTTAT CGTGCCGGAA ACGGCCAAGA TATTGCCGCT GTTCCAGCTG
ATGATTAAGC GCAACACCAA GATCGCCATG GTGGTGGATG AATACGGCAG TGGCCACGGT
ATAGTCACCC TGGAAGACAT CATCGAGTCC CTGCTGGGCC TTGAGATTGT CGACAGCAAC
GACCCTGTGA CCGACATGCA GCAACTGGCG AGACGCCTGT GGAAGCGCCG CATGACTCAC
AAGGGGATAC GCATCTCGGA TGAGGGCTCG TCAGAAGATG ACGAAACGCC GAAGAGCGAG
CCACCAGAGG CCAGCGTCGC TGAGACAGAA CCTCTGGGTA AGGTGAGCAA ATAA
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| Protein sequence | MITLIVIVFV AIGISFLCSV FEAVLLSVTP SFIANLKETH PAAAERLSHQ KENVESPLVS
ILTLNTIAHT VGAAVAGAQA AKVFGDEMLG VFSGVLTFLI LFFSEIIPKT LGANYWRSLA
PSVSLVLLWM ERITKPLIWM SQQVTRKLGK GDDGQYIRQE MSAMAKIGHE SGELDEQESM
ILTQMLSVKE MPVTAIMTPR TVMFSVPATM TQTEFAKLHK KSPFTRIPVF DGDRDNIVGY
VNRNTILLSE RDTPQAPISA VRRNLVIVPE TAKILPLFQL MIKRNTKIAM VVDEYGSGHG
IVTLEDIIES LLGLEIVDSN DPVTDMQQLA RRLWKRRMTH KGIRISDEGS SEDDETPKSE
PPEASVAETE PLGKVSK
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