| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1267 |
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| Symbol | |
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| ID | 4920880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1465559 |
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| End bp | 1466788 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640162807 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001093396 |
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| Protein GI | 127512199 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0699075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCA TTACAACTCC TCTTACCAAT ACTCAAATCA AAAACCAAAA ACCTGGTCCG
AAGGATATCG TTCTATCTGA TGGAGGCGGA TTGCAGCTTC GAGTGAGGAC TAACGGCTCA
AAGCTATGGA ACTATAACTA CTATCATCCA GTCACTAAAA AACGAGTCAA CATTGGGATC
GGTCCATACC CTGATATTCC ATTAGCTAAA GCCCGCGAAA TTGCTTTGGA ATACCGACAA
CTAGTAGCCT GCGGTGTTGA CCCCAAAAGT AAGCGAGAAC AAGAATCATT AAAATTAAAG
CAAGAGGTTC TATATACCCT TAAGAATGTT GCTGCCGAGT GGTTAGAGAT CAAAAAAAGC
GAGGTGACTA AAAGCCATGC AGCCAAAACA TGGAGCTCAT TAGAAAGCCA TGTATTCCCT
GAACTAGGAG ATACACCGCT AAACAAAATA ACAGCCCCAC TGGTGATAAA AGTTTTTCGC
CCAATTGAAG CAAAAGGCAG CTTAGAAACC ATAAAGCGAC TTAGCCAAAG GCTAAATGAG
ATTATGAACT TCGGAGTTAA CTGTGGCTAT ATAGATTCAA ATCCATTAGT TGGTATTCGT
GCGGCATTTA AAAAACCAAA AAAAGAAAGT ATGGCCACAC TAACTCCATC AGAACTACCA
CTTCTTATGC GCCACCTCTC TCAAGCATCA ATTAAGCGTG TCACTCGTTG CCTTATCGAA
TGGCAATTAC ACACAATGAC ACGCCCTTCG GAAGCAGCTA CTGCCCGCTG GGATGAATTA
GATCTTGATA ATTTAACTTG GACAATTCCC GCTGAAAAAA TGAAAAGGCG CCGTGAGCAT
GTTATTCCAC TTACTCAGCA GATGCTAGGC ATCCTTGACG CGATAAAACC CATAAGTGGG
CACAGAGATT ACATATTCCC TGCAGATAGA GATCCTAAGT CGCACTGCAA CACGCAAACA
GCCAATGTTG CATTAAAACG TATGGGGCTA AAAGGAAAAT TGGTAAGCCA TGGCATGCGA
GCACTCGCTA GCACCACGCT AAACGAGCAA GGCTTTGAAT CTGACTTAAT TGAGGCTGCA
TTATCTCACG TAGATGCAAA TCAGGTTCGG GCGGCATATA ACCGCTCCGA TTTCCTGGAG
CGGCGCCGTC CAATGATGAG CTGGTGGAGC AAGCATATTG AAGAGGCTTC CCAAGGAAAT
TTGTCCGTTT CATGCCGGCG AGTCAGTTGA
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| Protein sequence | MAVITTPLTN TQIKNQKPGP KDIVLSDGGG LQLRVRTNGS KLWNYNYYHP VTKKRVNIGI
GPYPDIPLAK AREIALEYRQ LVACGVDPKS KREQESLKLK QEVLYTLKNV AAEWLEIKKS
EVTKSHAAKT WSSLESHVFP ELGDTPLNKI TAPLVIKVFR PIEAKGSLET IKRLSQRLNE
IMNFGVNCGY IDSNPLVGIR AAFKKPKKES MATLTPSELP LLMRHLSQAS IKRVTRCLIE
WQLHTMTRPS EAATARWDEL DLDNLTWTIP AEKMKRRREH VIPLTQQMLG ILDAIKPISG
HRDYIFPADR DPKSHCNTQT ANVALKRMGL KGKLVSHGMR ALASTTLNEQ GFESDLIEAA
LSHVDANQVR AAYNRSDFLE RRRPMMSWWS KHIEEASQGN LSVSCRRVS
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