Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1238 |
Symbol | |
ID | 4924026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1437952 |
End bp | 1438314 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640162778 |
Product | hypothetical protein |
Protein accession | YP_001093367 |
Protein GI | 127512170 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0278337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTAT CCATCGGCCT ATCCCTTTGC CTAGCCCTTT GCCTATCCCT TTGTTTGGCC TTTATCGCCT TTGGCGCCTT GGCACTGGCC ATGTTCAGCC ACTTCAAAAG CTGCTTCAAG CGGCCACCCA CACAGAGGCA ACAGAGGGCG CTTACCCTGA CAGGCTGGGC CTCACTCGCC TTAAGCTTTC TCGCGCTGCT CGGCCAATAT GAGCCCGCCT ACGCGACAAT TTTGCTGTTT GGCGTGATGA GCGCCGCGGC GCTGATGGTG ATCTTGCTGC TTAGCTATCA GGCAAAACGC CTGCCCGCTA GCCTAGCGGT CGCCGCCTTG CTGGCGCTGG TTGACTTTAG CCTGTTTGTT TAA
|
Protein sequence | MNLSIGLSLC LALCLSLCLA FIAFGALALA MFSHFKSCFK RPPTQRQQRA LTLTGWASLA LSFLALLGQY EPAYATILLF GVMSAAALMV ILLLSYQAKR LPASLAVAAL LALVDFSLFV
|
| |