Gene Shew_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1238 
Symbol 
ID4924026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1437952 
End bp1438314 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content57% 
IMG OID640162778 
Producthypothetical protein 
Protein accessionYP_001093367 
Protein GI127512170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0278337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTAT CCATCGGCCT ATCCCTTTGC CTAGCCCTTT GCCTATCCCT TTGTTTGGCC 
TTTATCGCCT TTGGCGCCTT GGCACTGGCC ATGTTCAGCC ACTTCAAAAG CTGCTTCAAG
CGGCCACCCA CACAGAGGCA ACAGAGGGCG CTTACCCTGA CAGGCTGGGC CTCACTCGCC
TTAAGCTTTC TCGCGCTGCT CGGCCAATAT GAGCCCGCCT ACGCGACAAT TTTGCTGTTT
GGCGTGATGA GCGCCGCGGC GCTGATGGTG ATCTTGCTGC TTAGCTATCA GGCAAAACGC
CTGCCCGCTA GCCTAGCGGT CGCCGCCTTG CTGGCGCTGG TTGACTTTAG CCTGTTTGTT
TAA
 
Protein sequence
MNLSIGLSLC LALCLSLCLA FIAFGALALA MFSHFKSCFK RPPTQRQQRA LTLTGWASLA 
LSFLALLGQY EPAYATILLF GVMSAAALMV ILLLSYQAKR LPASLAVAAL LALVDFSLFV