| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1165 |
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| Symbol | |
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| ID | 4924139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1341110 |
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| End bp | 1341319 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640162699 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001093294 |
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| Protein GI | 127512097 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.122246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAATA CAACTGGTAC CGTTAAGTGG TTTAACGAAG ATAAAGGTTT TGGTTTCATC
GAGCAGGCAA ATGGCGGCGC TGATGTGTTC GTGCATTTCC GCGCTATCGT ATCTGACGGA
TACAAGACGC TAGCCGAAGG CCAAAAGGTC ACCTTCGATA TCGAGCAAGG TCAAAAAGGC
TTGCAAGCAG CGAACGTAGT TCCGGCTTAA
|
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| Protein sequence | MSNTTGTVKW FNEDKGFGFI EQANGGADVF VHFRAIVSDG YKTLAEGQKV TFDIEQGQKG
LQAANVVPA
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