Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1157 |
Symbol | |
ID | 4921558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1329935 |
End bp | 1331572 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640162691 |
Product | alkaline phosphatase |
Protein accession | YP_001093286 |
Protein GI | 127512089 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1785] Alkaline phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00798229 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATAAGA AACTACTAGT ACTGTCTCTA GCAGCCATTC TCGGCCTAGC GGCTTGTGGT AGCGACGGTG ATAACGGTAA AGATGGCACC GCGGGTACGC CAGGTACCGA CGGTAGCAAC GGCACTAACG GCAAAGACTG GACCGGCGTT AACCAATGGT ATGTCGATGG CCAAAACCGC GTCACTAAGG CGTCGGGCAT GACCAACAAC AATGAGGCAG GCGCCGCCAA GAACATCATT CTGTTTGTGG GCGACGGCAT GGGCGTGTCA ACCGTGACGG CGGCGCGCAT CCTCGACGGT CAGCTAAAAG GTCAGACAGG TGAAGAGAAC TCACTCTCTT TCGAGACCCT GCCTCACCTA GGCCTGGCTA AGACCTATAA CGTCGATGGC CAAACGCCAG ACTCTGCCGG CACCATGACC GCCATGGTCA CAGGTGTGAA GACAGACGTA GGCGTGATCT CTCAGGGTGA AGGCGTCGAG CGCGGTGTCT GTTCATCAAC TACAGGCCAA GATCTGGTCA CCTCGCTGGA ACTGGCCGCC ATGGCGGGCA TGTCTACCGG TGTGGTCTCT ACCGCCCGTA TCACTCACGC CACCCCTGCG GCGACCTATG CCCACGTGCC AGAGCGTGAT TGGGAAGCAG ACAGCAACCT GCCGGCCGAA GCCGTTACCA ATGGCTGTAA AGACATTGCC GCCCAGATGC TGGACTTCAA CGACGGTAAG GGGATCAACG TGGTCATGGG TGGCGGTCGT CGCGCCTTCA TCCCTAACAC CACTGTCGAT CCAGAAGGCA AGGCGGGTAA GCGTAAAGAT GGTCGTGACC TGACCGCCGA GTGGATGGCG CAGTACCCTA ACGCCGCCTA TGTTACCGAC CGTGACAGCT TCCTGGCCAT GGACACAAGC ACTACAGAGC ACGCCCTGGG TCTGTTCAAC TCGTCTCACA TGGAATATGA CTACGACAGA GTCGAAGATG GCGTAAACGG CGAGCCTTCA CTTGCAGAGA TGACGGCTAA GAGTATCGAC ATTCTGAGCA AGAACGACAA AGGCTTCGTG CTGATCGTCG AAGCCGGTCG TATCGACCAC GCTCACCATG CCGGTAACGC GGCCCGTGCC CTGCACGACA CCATCGCTCT GTCTGAGGCA GTACGTGTGG CCATGGAGAA AACTTCGGCT AACGACACCC TGTTGATGGT GACCGCCGAC CACAGCCACG TGTTCACCAT CGCAGGTTAT CCAACCCGTG GTAACCCTAT CCTGGGTCTG GTTAAGAGCA ACGACTCAAA CGGTCAGCCG TCTGTGACTA ACTCTACCGA TGCCAACGGC ATGCCATACA CCACTGTCGG CTATGCCAAC GGTCTGGGCT TTGGCTCACT GGAAACTGGT GGCGACGAGC GTTACAACTA CGCTGCCGAG CCTGGTCGTG TGGATCTGAA CTACATAGAC ACCCAGAGTG CCGGTTTCCA CCAGGAAGCC CTGGTACCGC TGGAAAGCGA AACCCATGCC GGTGAAGATG TGGCCATCTT CGCTCGTGGC CCAGGTGCAA GCCTGGTTGA GGGTACCGTA GAGCAGAATC ACATCTTCCA TGTGATGAAC TATGCCGGTG ACCTGGTCAA GAAGGCAGAA GCCGCCGCGG CGCAATAA
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Protein sequence | MNKKLLVLSL AAILGLAACG SDGDNGKDGT AGTPGTDGSN GTNGKDWTGV NQWYVDGQNR VTKASGMTNN NEAGAAKNII LFVGDGMGVS TVTAARILDG QLKGQTGEEN SLSFETLPHL GLAKTYNVDG QTPDSAGTMT AMVTGVKTDV GVISQGEGVE RGVCSSTTGQ DLVTSLELAA MAGMSTGVVS TARITHATPA ATYAHVPERD WEADSNLPAE AVTNGCKDIA AQMLDFNDGK GINVVMGGGR RAFIPNTTVD PEGKAGKRKD GRDLTAEWMA QYPNAAYVTD RDSFLAMDTS TTEHALGLFN SSHMEYDYDR VEDGVNGEPS LAEMTAKSID ILSKNDKGFV LIVEAGRIDH AHHAGNAARA LHDTIALSEA VRVAMEKTSA NDTLLMVTAD HSHVFTIAGY PTRGNPILGL VKSNDSNGQP SVTNSTDANG MPYTTVGYAN GLGFGSLETG GDERYNYAAE PGRVDLNYID TQSAGFHQEA LVPLESETHA GEDVAIFARG PGASLVEGTV EQNHIFHVMN YAGDLVKKAE AAAAQ
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