| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1134 |
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| Symbol | |
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| ID | 4923685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1309733 |
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| End bp | 1310023 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162669 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093264 |
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| Protein GI | 127512067 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1872] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00251] conserved hypothetical protein TIGR00251 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000408798 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.51106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGGTTG TCACCAAAGA ACAAGACGAC CTCGTCATCA GGCTCTATAT TCAGCCTAAA
GCCAGTCGGG ACCAGATTGT TGGTCCCCAC GGCGACGAGC TTAAGGTGGC CATTACCGCC
CCGCCCATCG ACGGCAAGGC CAATGCTCAC CTGTGTAAGT TTCTGGCGAA GCAGTTTAAG
ACGGCCAAGG GCAATATCCT TATCGAGAAG GGGGAACTTG GGCGCCACAA GCAGATCCGC
GTGGTGATGC CAAAAGAGAT CCCCGAGGCT ATATCTGTCT TAATCCCATG A
|
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| Protein sequence | MGVVTKEQDD LVIRLYIQPK ASRDQIVGPH GDELKVAITA PPIDGKANAH LCKFLAKQFK
TAKGNILIEK GELGRHKQIR VVMPKEIPEA ISVLIP
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