| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1118 |
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| Symbol | |
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| ID | 4920997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1293141 |
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| End bp | 1294304 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162651 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093248 |
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| Protein GI | 127512051 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4299] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0402787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCTA AAACAGATAC CCATCCAAAA CCGGCCGCGA AACCCAGGCT GATGTCGCTC
GATGCCCTAA GGGGCTTCGA TATGTTCTGG ATCCTGGGGG GCGAGGCATT GTTTGCGGCG
TTGCTCGTCT GGACTGGCTG GCAGGGCTGG CGTATCGCCG ATGCCCAGAT GCACCACAGT
CAGTGGCATG GCTTTACCTT CTACGACCTT ATCTTCCCTC TATTTATCTT TCTCTCCGGC
GTCGCCTTAG GCCTATCGCC CAAACGCCTG GACTCGCTGC CCTGGCCCGA GCGTCTTCCC
CTCTATCGCC ACGCGATAAA ACGTTTGATG CTGCTGCTTC TGTTTGGGGT GCTCTATAAC
CATGGCTGGG GTACAGGCAT GCCGATGGCG GCGGATGAGG TGAGATATGC CAGCGTGCTG
GGACGCATCG CCTTTGCCTG GTTCTTCGCC GCCTTACTGG TGTGGCATAC CGACCTGAAG
ACGCAGATCT TGGTCGCCAT CGGTATACTC CTCGGATACG CCGCGATGCA GCTGTGGCTG
CCGGTTCCCG GCGGCGTGGC GGGGGACTTC TCTATCTCTG GCTCGATTAA CGCCTATGTG
GACGGCAAGT TTCTGCCCGG TATTAGCTAT CAGGGCAGGG CGACAGACCC TGAGGGGATC
CTCTCGACCC TTCCAGCCAT AGTCAATGCC TTAGCGGGTG TCTTTACCGG TCGCTTCATC
GTTAAGTCTC ATCCCAAGTG GGGAGGGGTA AAGGGCGAGT GGGCTAAGGT TGGCATCTTG
TTACTTGCTG GCTTGCTCAG CCTGGGGCTA GGCTGGTTGA TGAACCCTTA TATTCCGGTA
AACAAAGATC TCTGGACCAG CAGCTTTGTC ATGGTCACCC TGGGCTGGAG CCTTATCTTA
CTCGCCATCT TCTATGCGCT GGTGGATGTG CTAAAGCTGC ACAGATTGGC ATTTGGATTT
GTGGTCATAG GCTGCAATGC CATCATCATC TATTTGGCAT CAAGCCTGGT TAAATGGGAC
TACCTTGCCA GCAGCCTATT TGGCGGCGCG ATACAGGCGC TGCCGATTGA GATGCAGCCT
CTGGCGTCAG CCTGCGCCAT GCTCTTGGTG CAGTGGTTGC TGCTCTACTG GATGTATAAG
CGCGGCATCT TCATCAAGGT TTAA
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| Protein sequence | MEPKTDTHPK PAAKPRLMSL DALRGFDMFW ILGGEALFAA LLVWTGWQGW RIADAQMHHS
QWHGFTFYDL IFPLFIFLSG VALGLSPKRL DSLPWPERLP LYRHAIKRLM LLLLFGVLYN
HGWGTGMPMA ADEVRYASVL GRIAFAWFFA ALLVWHTDLK TQILVAIGIL LGYAAMQLWL
PVPGGVAGDF SISGSINAYV DGKFLPGISY QGRATDPEGI LSTLPAIVNA LAGVFTGRFI
VKSHPKWGGV KGEWAKVGIL LLAGLLSLGL GWLMNPYIPV NKDLWTSSFV MVTLGWSLIL
LAIFYALVDV LKLHRLAFGF VVIGCNAIII YLASSLVKWD YLASSLFGGA IQALPIEMQP
LASACAMLLV QWLLLYWMYK RGIFIKV
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