| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1111 |
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| Symbol | |
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| ID | 4921426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1280073 |
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| End bp | 1281092 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640162644 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001093241 |
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| Protein GI | 127512044 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0121938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCA CCATTAATGA CGTCGCCAAA TATGCCGGCG TCTCCATAAA AACGGTTTCA
CGGGTCACAA ATAACGAGCC TTCGGTTCGT CAGGCGACGA TTGATAAAGT GAATCAGGCG
ATTGCCGCAC TTAACTACCA GCCTAATGTC GCTGCCCGTA ATCTAGCCGG CACAAAATCC
TACGTGATCG CCTTTGTCTA CGACAACCCT AATGCCTACT ATGTCATTGA TATGCAAAAT
GGTATTTTGT CATCTTGTAA GCAAAGAGGC TATGAGCTCC TCATCCATCC CTGCGATGCT
AAGTCAGATA ATATCTGCCA GGAGCTGGTC GATATGGTGC GCCATGCCAG GCTGTCAGGC
TTGGTTTTAA CCCCGCCGCT ATCGGAAGAC CCAAAAGTCT TGGCTGCCTT GGATCAGATT
AATGCCAATT ATGTACGCAT TATTGCAGGG GAAGAGGTGA GCACAACCGA TGGCTTATCG
ATCCTGGTCA ACGATAAACA TGGAGCGGTT TCCATCACCC AGCACCTTAT CGATCTCGGC
CATAAAAATA TCGCCTTTCT GAGCGGTGAC CATCAGCACG AATCCACCAA GGAACGTCTC
GCCGGTTTTA AGGCCGCCCT GCAAAGCAAT CACCTATCGC TTGACGAGTC CAACATCATC
AATGGTCAGT ATTCTTTTGA ATCGGGTGTA GAAGGCGCTA AAACACTGCT GGCGAAAGCC
AATCGGCCGA CGGCCATAGT CGCCTGTAAC GATGAAATTG CCGCGGGGGC TCTCTTCGCG
GCTAGGTTAG CAGGGGTAGC AATACCCGAC GAACTCTCTA TCGTGGGTTT CGAGGACAGC
CCCTTCTCTA GACAGACCTG GCCTAAGCTA ACCACAGTCC ATCAGCCAAA TAAGTTGATA
GCGCAGACGG CAACCGAGTT ACTTATCGAG AATCAGGGCA ACAAGCAGAG TGAGACGGCT
CATCAGGTCT TCATTCCCGA GCCGGTACTA AGAGACTCAT CGGCAAGCCC AAAGGCCTAG
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| Protein sequence | MKVTINDVAK YAGVSIKTVS RVTNNEPSVR QATIDKVNQA IAALNYQPNV AARNLAGTKS
YVIAFVYDNP NAYYVIDMQN GILSSCKQRG YELLIHPCDA KSDNICQELV DMVRHARLSG
LVLTPPLSED PKVLAALDQI NANYVRIIAG EEVSTTDGLS ILVNDKHGAV SITQHLIDLG
HKNIAFLSGD HQHESTKERL AGFKAALQSN HLSLDESNII NGQYSFESGV EGAKTLLAKA
NRPTAIVACN DEIAAGALFA ARLAGVAIPD ELSIVGFEDS PFSRQTWPKL TTVHQPNKLI
AQTATELLIE NQGNKQSETA HQVFIPEPVL RDSSASPKA
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